| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0467 |
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| Symbol | |
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| ID | 8011664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 483756 |
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| End bp | 488366 |
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| Gene Length | 4611 bp |
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| Protein Length | 1536 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644823058 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002974312 |
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| Protein GI | 241203216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTA TGTTCGTCAA AGCACGGGTG ATCAGTAGGG GGGCTGGACG GAGGATTGTC
CCGGCCGCGG CCTATCGCCA TCGCGCCCGG ATGATGGACG AACAGGCCGG CACGTCCTTC
AGCTACCGAG GCGGGAGGGC CGAACTGGTG CATGAGGAGC TGGCTTTGCC GACGCAGGTA
CCGGAATGGC TGCGCACGGC AATCGATTGC CGCACCGTTG CAGCGGCGAG CGAGGCGCTG
TGGAATGCCG TGGAGGCGTT CGAAAAACGG CCGGACGCGC AGCTCGCCCG CGAACTGATC
ATCGCGCTGC CAGAGGAGTT GACGCAAGCC GAAAACATCG CGCTGGTGCG CGAATTCGTC
CATGACAACC TGACCTCGAG GGGGATGGTT GCGGACTGGG TCTATCACGA CAAGGACGAC
AACCCACACA TCCATTTGAT GATGACATTG AGGCCCTTGA AGGAGGAGGG CTTCGGCGCG
AAGACGGTTC AAGTGCTCGA CGAAGGCGGT AAGCCGCTGC GCGTGGTCAC GCTCGACCGG
CCGAAGGGCA GGATCGTTAG CAAGGCCTGG GCCGGCGACA AGGAAACCAT GAAGGGCTGG
AAGATCGCCT GGGCGGACAC GGCCAACCGG CACCTGGCGT TTGCCGGCCA CGAGATCCGG
CTCGATGGCC GCTCCTATGC CGAGCAGGGT CTCGATGGCA TCGCGCAAAG ACATCTCGGT
CCGGAGAAGG CAGCACACTC CCGCAGGGGC AGGCAACCTT ATTACGCGTC GGCCGGTCTT
GCCCGGCGGC AAGGGGTGGT CGATCGGCTG CTCTCCGAAC CGGAGTTTCT GTTGAAGCGG
CTCGGGAATG AACGCTCCAC CTTCGATGAG CGCGATATTG CCAAGGCTCT GCATCGATAT
GTCGACGATC CTTCGGACTT CGCTAATATC CGCGCGCGGC TGATGGCGTC GGACGACCTG
GTCATGTTGA AGCCGCAGGA GGTCGATCCT GAAACGGGTA ATGCGTCGGA ACCCGCTGTC
TTCACCACGC GCGAGATACT GCGCATCGAG TATGACATGG CGCGGTCGGC ACAGGTGTTG
TCAGAGCACA AAGGTTTTGC CGTTCCGTCA CGGTATATCG CGGCCGCCGT CAAAAGCGTC
GAAGCTGGCG ATCTCGACAA ACCCTTCAAG CTCGATGCGG AACAGATCAA TGCCATCAGT
CATATCACCG GTGACAGCGG CATTGCTGCG GTGGTCGGCC TTGCCGGTGC CGGCAAGTCG
ACCCTGCTTG CCGCGGCACG TGTCGCCTGG GAAGGCGAAG GTCGCCGGGT GATCGGCGCG
GCCCTTGCGG GCAAGGCCGC TGAGGGGCTG GAAGACAGTT CCGGCATCAG GTCGCGAACG
CTCGCCGCCT GGGAACTTAT ATGGGCCAAT GGACACGAGA CGCTCCGTCG TGGTGATGTG
CTTGTCGTCG ACGAGGCCGG AATGGTGTCG TCGCAGCAGA TGGCGCGTGT GTTGAAGATT
GCTGAAGATG CAGGCACCAA AGTCGTTCTG GTCGGCGATG CGATGCAACT GCAGCCGATC
CAGGCGGGTG CGGCGTTCCG GGCGATCACC GAGCGGATCG GTTTTGCCGA ACTCGCCGGC
GTACGACGGC AGCGCCAGCA ATGGGCGCGC GAGGCGTCGC GGCTCTTTGC TCGTGGCGAG
ATCGAGAAAG GTCTCGACGT CTATGCGCAG CAGGGCCATC TCATCGAGGC TGGGACACGG
GACGAAGTCA TCGGGCGGAT TGTTGGCGAT TGGAGCGAAG CGCGCCGACA GGCGATCGAG
ACGTCGGTCC TCAAAGTCAA TGGTGGCCGT CTTCGCGGCG ATGAGCTGCT GGTACTCGCC
CACACAAATC AAGACGTGAA GCGTCTGAAC GAGGCACTGC GATCGGTGAT ATCGGACGCG
GGCGCGCTGG GTGAGAACCG CTCTTTCCGG ACCGAACGCG GAGCGCGGGA ATTCGCCGCC
GGCGACCGCA TCATCTTCCT GGAGAATGCC CGTTTCCTTG AGCCACGTGC TCCCCGTCTC
GGCCCGCAAT ATGTGAAGAA CGGCATGCTC GGCACGGTCG TTTCCACCGG CGACAAACGT
GGCGACACAC TGCTGTCGGT CCGTCTCGAC AATGGCCGCG ATGTCGTCAT CAGTGAGGAC
AGCTATCGCA ATGTCGATCA TGGCTACGCC GCGACCATCC ACAAATCACA AGGTGCCACC
GTCGAGCGAA CCTTCGTGCT CGCCACCGGC ATGATGGACC AGCACCTGAC CTATGTGTCG
ATGACCCGGC ATCGCGGCCG CGCAGACCTC TATGCCGCGA AGGAAGACTT TGAAGCGAAG
CCGGAATGGG GACGAAAGCA GCGTGCCGAT CATGCCGCCG GCGTGACCGG TGAGCTCGTG
GAAAGCGGAC AAGCCAAGTT CCGGCCGAAT GACGAGGATG CCGACGACAG TCCTTATGCC
GACGTCAGAA CGGATGACGG AACCGTCCAT CGTCTCTGGG GTGTGAGCTT GCCGAAGGCG
CTCGAAGAAG GTGGTGTCTC AGAAGGCGAC TCGGTGACCC TGCGCAAGGA CGGTGTCGAG
AAGGTCAAGG TTCAGGTTCC GGTCGTCGAT GAACAAACCG GGCAGAAGCG TTACGAGGAA
CGTGAGGTCG ACCGCAATGT CTGGACCGCC AAACGCATCG AAACCGCCGA AGCCCGCCTG
GAACGCATCG AGCAGGAAAG CCATCGGCCG CATGTGTTCA AGCAGTTGGT CCTGCGCCTG
TCGCGCTCCG GTGCCAAGAC GACGACACTC GATTTCGAGA GCGAGGCCAG CTACCAGGCT
CATGCCGACG ATTTCGCCCG GCGTCGTGGG ATCGACACTC TTTCTCAAAC TGCGGCCGGC
ATGGAGGAAG GCGTCTCCCG CCGGTTGGCG TGGATTGCCG AGAAGCGCGA GCAGGTGGCT
GAGCTCTGGG AGCGGGCCAG CGTTGCGCTC GGATTTGCGA TCGAGCGGGA ACGGCGTGTT
TCGTACAATG AGGCGCGAAT TGAAACGCAA ACTGTCTCGG ATGCAGATGC TGGCGGTGTG
CGGTATCTGA TCGCACCCAC CACGGAATTC GCCAGAAGCG CGGAGGAAGA TGCGCGCCTG
GCTCAGCTTT CTTCGCTGGC GTGGAAGGAA CGGGAAGCCA TCCTGCGGCC GCTGTTGGAG
AAGATCTATC GTGACCCGGA TGCAGCACTT GTCGCCCTGA ACGCCATGGC ATCGGATGTG
AAGATCGAAC CCCGCAGGCT TGCCGACGAT CTTGCCGCAG CGCCGGATCG GCTCGGCCGC
CTGCGTGGTT CCGATCTGAT CGTCGACGGC CGTGCGGCAC GCGACGAGCG CAGCATCGCG
ACCGCGGCAT TGACGGAACT GATACCGTTG GCCCGCGCCC ATGCGACGGA GTTCCGCAGG
AATGCTGAAC GGTTTGGTGT CCGTGAGCAA CAGCGCCGCG CTCACATGTC ATTGCCGATC
CCGGCTCTTT CCAGGCAGGT GATGGCGCGT CTCGTAGAGA TCGAAGCAGT GCGAGAAAGG
GGTGGTGACG ACGCCTACAA GACCGCCTTT GCGCTTGCCA CCGAAGACCG CTCGCTCGTG
CAGGAGGTCA AGGCGATCAG CGAGGCGCTG ACGGAACGCT TCGGCTGGAG CGCCTTCACA
TCCAAAGCCG ATGCAGTTGC CGAACGCAAC ATGGTCGAGC GTATGCCGGA AGACCTCACA
GGCATGAGAG GCGAGAAGTT GACCCGGCCG TTTGAAGCCG TGAAGCATTT TGCCGACGAG
CAGCATCTCG TCGAGCGGCG GGATCGTTCG AAGATTGTTG CCGGCGCCAA TGCCGATCCC
GAGAGGGAGA ATGTCCCCAT GCTCGCCGCA GTCACCGAAT TCAAGACCCC GATCGACGAG
GAGGCGAGAT CGCGCGCTCT CGCCACGCCG CTGTATCGCC AGCAGCGCGT AGCGCTGGCG
GCCGTGGCAA GCGCGATCTG GCGCGATCCG GCCGGCGCCG TCGGCAAGAT CGAAGAGCTG
CTCCAGAAAG GTTTTGCTGC CGAGCGCATC GCCGCGGCTG TGACCAACGA TCCGGCCGCC
TATGGTGCGC TCCGCGGCTC CAATCGCCTC ATGGACCGGA TGCTGGCTTC TGGCCGGGAG
CGGAAGGCGG CAGTGCAGGC CACGCCTGAA GTCGCCGCTC GCCTGCGGTC ACTCGGTTCG
GCCTACGTCA ATGTGCTCAA TGCCGAACGC CAGGCTATTG CCGAAGAACG ACGGCGCATG
GCAGTCGCCA TTCCCGGCCT CTCGAAGGCG GCGGAAGAGG TACTCACGCG GCTAGCTGCC
GAGTCGAAGA GCAACGCTCG CAAGCTGAAC GCATCGGCCT TTTTTCTCGA TCCAAATATT
CGCCAGGAAT TTGCCGCTGT CAGCAGGGCG CTCGACGAGC GCTTTGGTCG TGATGCGATC
CTCCGCCAAG CGAAGGATCG CATCAACCGT GTTCCACCGC CACATCGCAC GGCCTTCGAG
GCGATGCAGG ACAGGCTGAA AATCCTGCAG CAGGCCGTTC GTATTGAAAG CAGCGACAGG
ATTATCTCGG AGCGGCGCCA GCGCACCGCC AACCGCGGCG TCGATCTCTA A
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| Protein sequence | MAIMFVKARV ISRGAGRRIV PAAAYRHRAR MMDEQAGTSF SYRGGRAELV HEELALPTQV
PEWLRTAIDC RTVAAASEAL WNAVEAFEKR PDAQLARELI IALPEELTQA ENIALVREFV
HDNLTSRGMV ADWVYHDKDD NPHIHLMMTL RPLKEEGFGA KTVQVLDEGG KPLRVVTLDR
PKGRIVSKAW AGDKETMKGW KIAWADTANR HLAFAGHEIR LDGRSYAEQG LDGIAQRHLG
PEKAAHSRRG RQPYYASAGL ARRQGVVDRL LSEPEFLLKR LGNERSTFDE RDIAKALHRY
VDDPSDFANI RARLMASDDL VMLKPQEVDP ETGNASEPAV FTTREILRIE YDMARSAQVL
SEHKGFAVPS RYIAAAVKSV EAGDLDKPFK LDAEQINAIS HITGDSGIAA VVGLAGAGKS
TLLAAARVAW EGEGRRVIGA ALAGKAAEGL EDSSGIRSRT LAAWELIWAN GHETLRRGDV
LVVDEAGMVS SQQMARVLKI AEDAGTKVVL VGDAMQLQPI QAGAAFRAIT ERIGFAELAG
VRRQRQQWAR EASRLFARGE IEKGLDVYAQ QGHLIEAGTR DEVIGRIVGD WSEARRQAIE
TSVLKVNGGR LRGDELLVLA HTNQDVKRLN EALRSVISDA GALGENRSFR TERGAREFAA
GDRIIFLENA RFLEPRAPRL GPQYVKNGML GTVVSTGDKR GDTLLSVRLD NGRDVVISED
SYRNVDHGYA ATIHKSQGAT VERTFVLATG MMDQHLTYVS MTRHRGRADL YAAKEDFEAK
PEWGRKQRAD HAAGVTGELV ESGQAKFRPN DEDADDSPYA DVRTDDGTVH RLWGVSLPKA
LEEGGVSEGD SVTLRKDGVE KVKVQVPVVD EQTGQKRYEE REVDRNVWTA KRIETAEARL
ERIEQESHRP HVFKQLVLRL SRSGAKTTTL DFESEASYQA HADDFARRRG IDTLSQTAAG
MEEGVSRRLA WIAEKREQVA ELWERASVAL GFAIERERRV SYNEARIETQ TVSDADAGGV
RYLIAPTTEF ARSAEEDARL AQLSSLAWKE REAILRPLLE KIYRDPDAAL VALNAMASDV
KIEPRRLADD LAAAPDRLGR LRGSDLIVDG RAARDERSIA TAALTELIPL ARAHATEFRR
NAERFGVREQ QRRAHMSLPI PALSRQVMAR LVEIEAVRER GGDDAYKTAF ALATEDRSLV
QEVKAISEAL TERFGWSAFT SKADAVAERN MVERMPEDLT GMRGEKLTRP FEAVKHFADE
QHLVERRDRS KIVAGANADP ERENVPMLAA VTEFKTPIDE EARSRALATP LYRQQRVALA
AVASAIWRDP AGAVGKIEEL LQKGFAAERI AAAVTNDPAA YGALRGSNRL MDRMLASGRE
RKAAVQATPE VAARLRSLGS AYVNVLNAER QAIAEERRRM AVAIPGLSKA AEEVLTRLAA
ESKSNARKLN ASAFFLDPNI RQEFAAVSRA LDERFGRDAI LRQAKDRINR VPPPHRTAFE
AMQDRLKILQ QAVRIESSDR IISERRQRTA NRGVDL
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