Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0403 |
Symbol | |
ID | 8011607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 416005 |
End bp | 416874 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644822998 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002974253 |
Protein GI | 241203157 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000129919 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG CAAGTTGGGA TTCCTATCAG CTTTTCCTGC AGGTGGCCCG GCTTGGCGGG CTGACGGGGG CAAGCACCGC AAGCGGGCTC AGTCCTGCGA CCGTCGGCCG ACGTATGCTC GATCTCGAGC AGGAAATCGG CCGCGCATTG TTTTCGCGCA GCCAGACCGG ATACCGTCTG ACCCAGGATG GCCAGGCCCT GCTCGATCAC CTGCAGGAGA TGGAGGCCGC CGCCCGCAAG GTGGCGGCGT GGCGGCAATC CGGCGAGGGC GGCACGACCG TCAGGGTCGC TGCCGGCACC TGGCTCGCCT GGCTGCTGAC CGAGAATTTC GCCGCAATCC GCATGCCGGG CGATGCCTTC GCCATTTCGC TCACCATTGG CGAGGCGCGG GCAAGCCTTG CCTATCGCGA GAGCGATATC GGTATTCGCG CCTTCGAGCC TGAGGAGGCC AATCTTGCCG CACGTCTGCT CGGAGAGGTG GCCTATGCCG TCTATATCAG GCGCAACGCC GCCGAGACCG ACGAGCGCTG GATTGCCGTT GCTGAGGAAG AGGCGATATC GGCCTATCTG CGCTGGCCGC ACGCCCATGC CGCAACAGGG ATCGTCGCTA CCGTCAATCG GCCGCGTTCG CTGCCGGATC TGGTGCGCGC CGGCGCCGGC AAGACCGTTC TTCCCTGTTT CGTCGGCGAT CTCCATCCCG AATTGCAGCG GCAGGGCGGC GAGTTGCCGG AATTGCGCCA CCGGCAATGG ATCGTCATGA ATGCCGAGGA CCGCCACCGC CCGGAGATCC GGATGGTCGC CGACCGCATG ACCAAGCTCA TCAAAAGTTA TGCCGATCTC TTCGCCGGAA AACGACCGAG CCGCGGCTGA
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Protein sequence | MKNASWDSYQ LFLQVARLGG LTGASTASGL SPATVGRRML DLEQEIGRAL FSRSQTGYRL TQDGQALLDH LQEMEAAARK VAAWRQSGEG GTTVRVAAGT WLAWLLTENF AAIRMPGDAF AISLTIGEAR ASLAYRESDI GIRAFEPEEA NLAARLLGEV AYAVYIRRNA AETDERWIAV AEEEAISAYL RWPHAHAATG IVATVNRPRS LPDLVRAGAG KTVLPCFVGD LHPELQRQGG ELPELRHRQW IVMNAEDRHR PEIRMVADRM TKLIKSYADL FAGKRPSRG
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