Gene Rleg_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0396 
Symbol 
ID8011600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp406337 
End bp407635 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID644822991 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002974246 
Protein GI241203150 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.121903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0540762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGC AGGAGACGTG GCAGAGCCCG ATCGCGCCCG GGCTGTCCTG GTATCAGGCA 
ACCGTCGGGG AGCGGCCCAC CTACCCCGCT CTCGACGGCT CGAGAACATG TGACGTCGCA
ATTGTCGGCG GCGGCTATAC CGGCCTGCAG GCCGCCTATA ATCTTGCCAA GTCAGGCGTT
TCGGTGGTCC TTATCGAGGC CTACCGCTTC GGCGACGGGG CGTCCGGGCG CAATGGCGGC
CAACTCGGCA CCGGTCAGCG ATGGTGGCCG GAAGAACTCG AGGAGAAGAT CGGCTACGAA
CGCTCGAAGG CGCTGTTCGA TCTTGCCGAA GCGGCCAAGC GCCATCTCAT CGATTTCGCC
CGCGAGCATC AGATCGAGAT CGACTATGTG CCCGGCCAGC TCAACGTCGC ACACAAGGCG
AGCTACAAAC GCGACTATTA CGAAAATGCC GAAATCGCCG CCTTACGGTA CGGCTATCCG
CATCTAAGCT TTATGGACGA GAAGGAAACG CAGGAGAGGC TCGGTTCGAA GCGTTTCCAT
TGCGGTGTGC GCGATGTCGG CACCGGCCAC ATCCATCCGC TGAAACTGCT GGTCGGGCTG
GCGCGGGTCG CCGCAAATGC CGGCGCTGAA ATCTTCGAGA TGACCAAGGC AACGGCGATC
CGCCAAAGCG GCGGCAAGGT GACGATCGAA ACCGAAAGGG GAACGATCAC CGCCGAGCGC
GCACTGATCG CCTGCAACGG TCATATCGGC GACCTTGAAC CGGTAACGGC GAGCCATGTC
ATGCCGATCC GCTCCTTCAT CGGCGCCACG GCGCCGCTCG ACGGGCATGC CGGTGTGCTT
CCCGGGGGCG AGGCCGTGGC CGATTCGCGC TTCGTCGTGC GCTACTTCCG CAAATTCGGC
GATGGCCGCC TGCTGTTCGG CGGACGCGAA GCCTATACCT CGGACAATCC GCGCGACATT
TCAGAGCACA TCCGCCGGCA GATCGCCGAG ATCTATCCAG AGCTGAAGGA CATCGAGATC
ACCCATGCCT GGGGCGGCAG CGTCGGCATC ACCCTGCCGC GCCAGCCCTT CGTGCGCGAG
GTCATGCCCG GCGTCATCTC GATCGGCGGT TATTCCGGCC ATGGCGTCAT GCTGTCAAAC
TACTGTGGCA AGCTCTATGC GGAAACGGTG CTTGGAACAT CCGGCGATCT CGATCTCTTC
ACATCGCTCG ATATTCCCGC CTTTCCCGGC GGAGCCCGGA TGCGCGCGCC GTTGCTTTTC
CTCGCCTTGT CGTGGTTTGC ACTTCGCGAC AAGTTTTAG
 
Protein sequence
MASQETWQSP IAPGLSWYQA TVGERPTYPA LDGSRTCDVA IVGGGYTGLQ AAYNLAKSGV 
SVVLIEAYRF GDGASGRNGG QLGTGQRWWP EELEEKIGYE RSKALFDLAE AAKRHLIDFA
REHQIEIDYV PGQLNVAHKA SYKRDYYENA EIAALRYGYP HLSFMDEKET QERLGSKRFH
CGVRDVGTGH IHPLKLLVGL ARVAANAGAE IFEMTKATAI RQSGGKVTIE TERGTITAER
ALIACNGHIG DLEPVTASHV MPIRSFIGAT APLDGHAGVL PGGEAVADSR FVVRYFRKFG
DGRLLFGGRE AYTSDNPRDI SEHIRRQIAE IYPELKDIEI THAWGGSVGI TLPRQPFVRE
VMPGVISIGG YSGHGVMLSN YCGKLYAETV LGTSGDLDLF TSLDIPAFPG GARMRAPLLF
LALSWFALRD KF