| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0378 |
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| Symbol | fliR |
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| ID | 8011584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 386692 |
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| End bp | 387444 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644822973 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_002974228 |
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| Protein GI | 241203132 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.296075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACAG ACCCGCAAGG GACCGTTCTC GCGCTGTTTC TGGTTTTCTG CCGGATCGGT
GGCTGTGTGC TGGCTCTTCC GGGTTTTTCC TCGGCGCGCG TGCCCGATCA GCTGCGCGTC
TTCATTGCGG GGGCGCTGTC GATCGCCGTC ATGCCGTTGC TCTGGGATAC CGTCTATCCG
GCCGTTCACA CCGGTGCCGG AACCTATATC GGCCTGATCT TCAGCGAATC GCTGATCGGC
GTGATGTATG GCATGCTGGC GAGGATCTAC ACGCTCGGCA TGCAGTTCGC CGCGACGATC
ATCGCCATGA TGGTCGGCTA CACCCAGCCG GGTTCCGCCG ACATCCTCGA AGACACGCCG
GAGACCAGCC TTTCCGGCTT CATTACCTTT GCCGGCATGA TGATTCTCTT CATTATGGAT
TTCCATCACA TCGTCTTCCG CGCGCTGATC GATTCCTACA CGACCATGCC CTTCGGCGGC
TTGATGCAGA TGCGCGCGAC GCTGATCTCC TTTACCGACA CGCTGGAGCA GACCACCTAC
ATCATGCTGC GGCTGTCGAG CCCGTTTTTG ATCTACGGCC TGATCTTCAA CGTCTCGATC
GGTTTCATCA ACAAGCTGGC GCCGCAGATC CCGGTCTACT TCATCTCCAC GCCCTATCTG
CTGATGGGCG GGCTCTTCCT GATCTATTTC TCGATTGCGG CGATGGTCAG CCAGTTCGGC
CAGTCCTTCG GCTCGATCTA TATCGGGCGA TGA
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| Protein sequence | MITDPQGTVL ALFLVFCRIG GCVLALPGFS SARVPDQLRV FIAGALSIAV MPLLWDTVYP
AVHTGAGTYI GLIFSESLIG VMYGMLARIY TLGMQFAATI IAMMVGYTQP GSADILEDTP
ETSLSGFITF AGMMILFIMD FHHIVFRALI DSYTTMPFGG LMQMRATLIS FTDTLEQTTY
IMLRLSSPFL IYGLIFNVSI GFINKLAPQI PVYFISTPYL LMGGLFLIYF SIAAMVSQFG
QSFGSIYIGR
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