Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0343 |
Symbol | |
ID | 8011553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 353495 |
End bp | 354079 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644822938 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_002974193 |
Protein GI | 241203097 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.24486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0165317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACGA AGAAAACACA GCAGAACAGC GACCTCTCCC TGGATCTTCC GGGCAGCGAA GCCGATCTCG ATCAGGCGAT CGACGATCTG CGCGGCGTAC TGAAGCAGGA TGCCGACGGC GACCTGCCGC AGTTTGGCGA CGACCCGCAG AGCGACCCCT TCGCAGCAGG AACGGACCTG GCGGCCTTCG GCGGCGAGGC TTCGGAAAGT CCTTTCGGCG GCGACGATTT CGGCGGCGAT TTCGGCGGCA GTGCGAGCTC GGCTGCCGGC ATGGATTTCG GCAGCAGCCC CTCCTTCGAG GAGTCACCGG CTCCACTCGG CAGCGCTTTG AATTCGAACT TCGACCTGAT CATGGACATC CCGATCGACG TCCAGATCAT GCTCGGCACC AGCCGCATGC AGGTCTCCGG CCTGATGAAC CTCAATGAAG GGGCGACGAT CGCCCTCGAC AAGAAAATCG GCGAACCGGT CGAGATTATG GTGAACGGCC GCAGGATTGC ACGTGGCGAA ATTACGGTGC TTGATAACGA CGACACGCGA TTCGGTGTGA AGCTGATTGA AGTTTTGAGT ACGAAAAAAG CCTGA
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Protein sequence | MATKKTQQNS DLSLDLPGSE ADLDQAIDDL RGVLKQDADG DLPQFGDDPQ SDPFAAGTDL AAFGGEASES PFGGDDFGGD FGGSASSAAG MDFGSSPSFE ESPAPLGSAL NSNFDLIMDI PIDVQIMLGT SRMQVSGLMN LNEGATIALD KKIGEPVEIM VNGRRIARGE ITVLDNDDTR FGVKLIEVLS TKKA
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