Gene Rleg_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0343 
Symbol 
ID8011553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp353495 
End bp354079 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content60% 
IMG OID644822938 
Productflagellar motor switch protein FliN 
Protein accessionYP_002974193 
Protein GI241203097 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.24486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0165317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGA AGAAAACACA GCAGAACAGC GACCTCTCCC TGGATCTTCC GGGCAGCGAA 
GCCGATCTCG ATCAGGCGAT CGACGATCTG CGCGGCGTAC TGAAGCAGGA TGCCGACGGC
GACCTGCCGC AGTTTGGCGA CGACCCGCAG AGCGACCCCT TCGCAGCAGG AACGGACCTG
GCGGCCTTCG GCGGCGAGGC TTCGGAAAGT CCTTTCGGCG GCGACGATTT CGGCGGCGAT
TTCGGCGGCA GTGCGAGCTC GGCTGCCGGC ATGGATTTCG GCAGCAGCCC CTCCTTCGAG
GAGTCACCGG CTCCACTCGG CAGCGCTTTG AATTCGAACT TCGACCTGAT CATGGACATC
CCGATCGACG TCCAGATCAT GCTCGGCACC AGCCGCATGC AGGTCTCCGG CCTGATGAAC
CTCAATGAAG GGGCGACGAT CGCCCTCGAC AAGAAAATCG GCGAACCGGT CGAGATTATG
GTGAACGGCC GCAGGATTGC ACGTGGCGAA ATTACGGTGC TTGATAACGA CGACACGCGA
TTCGGTGTGA AGCTGATTGA AGTTTTGAGT ACGAAAAAAG CCTGA
 
Protein sequence
MATKKTQQNS DLSLDLPGSE ADLDQAIDDL RGVLKQDADG DLPQFGDDPQ SDPFAAGTDL 
AAFGGEASES PFGGDDFGGD FGGSASSAAG MDFGSSPSFE ESPAPLGSAL NSNFDLIMDI
PIDVQIMLGT SRMQVSGLMN LNEGATIALD KKIGEPVEIM VNGRRIARGE ITVLDNDDTR
FGVKLIEVLS TKKA