| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5348 |
|---|
| Symbol | |
|---|
| ID | 8007845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 235876 |
|---|
| End bp | 236319 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644822556 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_002973816 |
|---|
| Protein GI | 241114341 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.692382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CTGACTTTCG CCCTGCACGC CCTGAGGACT ATCCAGCCAT TCGCGCGCTG
CTCATTGAGG AAGGGCTGCC GAGCGAGGAT GTTGCGGTCG GGCAAGTCAG CCGCTTCCAC
CTGGCTGTGC AGGATGGAGA GCTTTTGGCT TGTGCAGGGT TGGAGCTATA CGGGTCGGAT
GCGCTGCTCC GATCGGTCGC CGTCGCCAAA TGCGCCCGCC AGAACGGTCT TGGCCGCGCC
CTCGTGGGAA TCGCCGAGCG CGATGCCTTT GCCATTGGCG TAAGCCGCCT CTTTCTGCTG
ACGACGACAG CAGCAGGCTA CTTCACCGCG CTGGGGTACG AGCGCTTCGA CCGGCGCTTG
GCGCCTGGCT CGCTTCAATC CAGCTCGCAA TTCAGCTTGC TGTGTCCGGC GTCCGCCACG
TGTATGACAA AGAACCTGCT GTAA
|
|---|
| Protein sequence | MSTPDFRPAR PEDYPAIRAL LIEEGLPSED VAVGQVSRFH LAVQDGELLA CAGLELYGSD
ALLRSVAVAK CARQNGLGRA LVGIAERDAF AIGVSRLFLL TTTAAGYFTA LGYERFDRRL
APGSLQSSSQ FSLLCPASAT CMTKNLL
|
|---|
| |