Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5205 |
Symbol | |
ID | 8007990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 102702 |
End bp | 104000 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644822416 |
Product | putative adhesin precursor |
Protein accession | YP_002973676 |
Protein GI | 241114201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.685771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCAA TTCTCGGTTA CATGATCGCC ATCGCCCTGT CGTTGCTGAG CGTGGGGCAG TTCTACCAGT GGCAGGCGTC GGGCATGACA AACGTGCAGA CTGCGGCCGC GGCAAGCCAG CAGGTGATCT ACAACAAGGC CGCGGCTCAG TACGTTCAAG ACAACGGGAC ATCGATCGCG GCGATTGCAA CGCCTACCGT GCCGGTGACC ATCACCACCG CAATGCTGAT CAGCAGCGGT TACTTGCCGA ACGGCTTTTC GACCACGAAT GTTTTCGGAC AGACATGGCA ACTTCAGGTC CTGCAGCCCA CCGCGGGGAC GTTGCAGTCG GTCGTGCAAT CGGTTGGCGG GAGGGCAATC GCGGACACTG TCCAGCTTGT TCAGATTGCC GCCCAAGCAG GGGCGCAGGG CGGATTCGTC CCCTATGCCG GCCAGAATGG TGACGCAACC ATGACCCCCG CAAATGCTTA CGGCGCATAC GGGGCATGGA AGCTTCCGTT GACCAATTTC ACCAATCCAG GCAGCGGTCA CCTGGTGTCA CTGCTTGCGT TCACAGGCGT GAGTGCGAAC AACAGCTATC TGTACCGCGT TCAGGTTCCT GGCCATCCCG AGCTGAACAA CATGCAGACC GACCTTGGTA TGACCGATCA AGGGGGGGCG CTGCACAACA TCAGTGGCGC ACAGCAGATC AGCTCACAAA GCTTGCAGGC TCTTTCCGGT GGTTCGCTTG CCGTGCCATC GATCACGACC GCAAACGGCA AAGTAGTCAC TTGGGAGCAG GTGGGCGAGG GCGGTGTGCT AGGCCTGAAA GGATCGAACG GTACATCGAT CTACCTTGAG AGCTTGAATG GCACGTTCCG TATCGTCAAC AACCCTTGGA CACAGTCCAT ATTCTCGGTC GACCAGTCCG GCGATGTGGT CGCGGCGGGA ACGCAGAGGC TGGGTAACGT TGCTTCGCCC AACACGGCGT GTGCCCAAAA CGGAACACAG GCAGGCAATG CTGATGGCTC TGGCCAGCAA TTAGTTTGTC TGTACAACGT GTGGAAACCA ATTGGCGGGA GCTTGCAGCG CTTCGGGTAT TACACCGCGC AACATGGTTC TGGAATTCCG AGGCCGACTT GTCCGGCGGG CGGAACCCCG ATGATCGTTG TGACCCCGGC GAACTTTGCG GTCGATCCGA CGACGGTCGT CAACTATGGA GCGTGGGGAT CAGGCCCGTG GACTGTCTAC ATCATGGATG GATCAAATGC CGGCATCGGT GGCGCGACTG CCACTGTTGG GACCTATTGC GGATACTAA
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Protein sequence | MDAILGYMIA IALSLLSVGQ FYQWQASGMT NVQTAAAASQ QVIYNKAAAQ YVQDNGTSIA AIATPTVPVT ITTAMLISSG YLPNGFSTTN VFGQTWQLQV LQPTAGTLQS VVQSVGGRAI ADTVQLVQIA AQAGAQGGFV PYAGQNGDAT MTPANAYGAY GAWKLPLTNF TNPGSGHLVS LLAFTGVSAN NSYLYRVQVP GHPELNNMQT DLGMTDQGGA LHNISGAQQI SSQSLQALSG GSLAVPSITT ANGKVVTWEQ VGEGGVLGLK GSNGTSIYLE SLNGTFRIVN NPWTQSIFSV DQSGDVVAAG TQRLGNVASP NTACAQNGTQ AGNADGSGQQ LVCLYNVWKP IGGSLQRFGY YTAQHGSGIP RPTCPAGGTP MIVVTPANFA VDPTTVVNYG AWGSGPWTVY IMDGSNAGIG GATATVGTYC GY
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