Gene Rleg_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5321 
Symbol 
ID8006958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp727655 
End bp729199 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content61% 
IMG OID644822227 
ProductABC transporter related 
Protein accessionYP_002973487 
Protein GI241113652 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0567275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.751648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CGCAACGCAA CAACGGGCCG AAAGGCGAGG TCGTCCTCGC CGCCCGCAAT 
ATCGCAAAAT CCTACGGCAG CGTTCACGCC CTCAAGGGAG TGAACTTCGA CATCCATCGC
GGCCAGGTCA CAACGCTGTT CGGAGAGAAC GGCGCCGGCA AGTCAACCTT GATGAAGATC
CTTTCGGGTG TGGCGCAGCC AAGCTCCGGC GAGATCATTC TCGACGGCTC ACCGATCAGC
TTTAGCTCAT CGACCCATGC GCGCGAGTGC GGGATCTCGA TCATTCACCA GGAGCTCAGC
CTGGCCCCCA ATCTGAGTGT CCGCGACAAT ATTTTCATGG GCCGGGAGAT CATCAAGGGC
GGTGTCGTCG ACTTCGCTGA AGAGGAGCGT CAGACCCGGG CGCTGATGGA AGAGCTCGAG
GAAGACATCG ATCCGCTGAC GCGCGTCGAG GATCTTCGCC TCGGCCAGCA GCAGATCGTC
GAGATTGCAC GGGCACTCTC CGTCAATTCG CGCATCCTGA TCATGGACGA GCCGACCTCG
GCGCTGAGCG CGACGGAGGT GGAAGTGCTC TTCAAGGTCA TCCACGACCT GACGAGCCGC
GGCGTGTCGA TCGTCTACAT ATCGCATCAT CTGGAAGAGG CGCTGCAGAT CACCAATCAC
GCCGTCGTTC TGCGCGACGG AAACATGACG GCCTATGCCG AGCGCAAGGA TATCGATCTC
GAATGGATCG TCCGCAACAT GGTCGGCGAG AATTTCGACC TTGGCAGCCC ACCGGAGGAT
CACCCGTTCG GAAACGTCTC GCTTTCCATC GAAAACCTCA GTGTCCCCGG TCCCTCCGGC
GCTGCTTATA ATGCAGTCGA TCGTCTGTCT CTCAAGGTGC GTGCCGGCGA AATCGTCTGC
ATCTACGGGC TGATGGGGGC GGGGCGCACG GAACTGCTCG AGTGCATTGC CGGACGTCTG
CGCGCAAGTG GCGGACAGGT TCTGCTCGAA GGACAGGACG TCAGTGCGCT CAGCATCGCC
AGGCGCATTG CCAGCGGTCT CGTGCTCGTG CCCGAAGATC GCCAGCGCGA CGGCCTCGTC
CAGACGATGA CGGTCGGCTC CAATCTGTCG CTTGCGAGTA TCCGCGCCTT CACCAAAGGG
CTTTTCACCT CCGGCCATCG GGAGCGCGAT CTCGTCAATG ACGCGATCCG GCGGGTGCAT
GTGAAAACCG ATGGCGGTGC GGCTTCGATC GGCTCGCTCT CCGGCGGCAA CCAGCAGAAG
GTCGTCATCG GCAAGATGCT GGCAACCCAG CCGAAGGTCA TCCTGCTTGA TGAGCCAAGC
CGCGGCATCG ACATCGGCGC CAAGGCGGAA GTTTTCAAAT TGCTCGCGGA GCGCGCCAAG
CAGGGATTGG CGGTCATCTA TTCGACGTCC GAAGTCAATG AATGCCTGAG TATCGCACAC
CGCATCATCG TCATGCACCG CGGCAGGATA TCGGCCGAGT TCGGCTCGGA TGTCACCAAG
GAAAAGATCA TGGCCGCCTC CGGCGAAGCC GTGATCGCGC ACTAG
 
Protein sequence
MSQPQRNNGP KGEVVLAARN IAKSYGSVHA LKGVNFDIHR GQVTTLFGEN GAGKSTLMKI 
LSGVAQPSSG EIILDGSPIS FSSSTHAREC GISIIHQELS LAPNLSVRDN IFMGREIIKG
GVVDFAEEER QTRALMEELE EDIDPLTRVE DLRLGQQQIV EIARALSVNS RILIMDEPTS
ALSATEVEVL FKVIHDLTSR GVSIVYISHH LEEALQITNH AVVLRDGNMT AYAERKDIDL
EWIVRNMVGE NFDLGSPPED HPFGNVSLSI ENLSVPGPSG AAYNAVDRLS LKVRAGEIVC
IYGLMGAGRT ELLECIAGRL RASGGQVLLE GQDVSALSIA RRIASGLVLV PEDRQRDGLV
QTMTVGSNLS LASIRAFTKG LFTSGHRERD LVNDAIRRVH VKTDGGAASI GSLSGGNQQK
VVIGKMLATQ PKVILLDEPS RGIDIGAKAE VFKLLAERAK QGLAVIYSTS EVNECLSIAH
RIIVMHRGRI SAEFGSDVTK EKIMAASGEA VIAH