| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5209 |
|---|
| Symbol | |
|---|
| ID | 8007104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 620291 |
|---|
| End bp | 621076 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822118 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_002973378 |
|---|
| Protein GI | 241113543 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.422684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCAGC GGATCATATC GAGCCGACAA CGTGAGATCC TTGCGCTGAT CGAAACGGAA
GGTGTTCAGT ACATCGAGGA ACTGGCACGT CGGTATGATC TGACGACACA GACGATCCGT
CGTGATATCA ATGCATTATG CGATCTCGGG CACGCACGCC GCTTCCACGG CGGCGTCGAC
TTGCCGGTCG CGGGCAGCAA CATCTCACTC AATGCTCGCG CCCAGCTCAA CCGACGGGCC
AAGCGGCTGA TCGCCAAGCG TGTCGCCGCC GACATAGGGG CAGACGCGAC AGTGTTCCTC
GGGATCGGCA GCACGGTTCG GTTCGTCGCC GAGGCGCTGC GTGATCACCA GGGTCTGACG
GTGATCACCA ATAACATCCA CGTCGCCTTG AGCCTTTGCG ACGCGCCGAG CGTCGAGGTC
CATTTGACGG GCGGACTTTT GCGCCACGAT GACCGCGACG TGGTGGGCAC GGATGTGATC
AGGTTCGTCG AAAAATTCTA TGCGACTTAC GCAGTCGTCG GCGCGGGCGC TTTGAGCCCG
CTCAACGGTC TGATGGATTT CAGCTATAGC GAAGCCCAAA TCACCAATGC CCTCCTTGAG
AATTCACAAA CGCAGATTCT GGCCGCAGAC GTCAGCAAGT GGACGCGCAA CGCGTCCGTG
CGTGTTGCGC CATTCAGCAA ACTCACCCGC TTCTACACCG ATCGGCTGCC TGGCGAAGCT
GCCGCCACCA ATGCCCTCGC CGAGAGCGGC TTGGACGTGG TCACATGCAG CGAGGATATG
ACATGA
|
|---|
| Protein sequence | MGQRIISSRQ REILALIETE GVQYIEELAR RYDLTTQTIR RDINALCDLG HARRFHGGVD
LPVAGSNISL NARAQLNRRA KRLIAKRVAA DIGADATVFL GIGSTVRFVA EALRDHQGLT
VITNNIHVAL SLCDAPSVEV HLTGGLLRHD DRDVVGTDVI RFVEKFYATY AVVGAGALSP
LNGLMDFSYS EAQITNALLE NSQTQILAAD VSKWTRNASV RVAPFSKLTR FYTDRLPGEA
AATNALAESG LDVVTCSEDM T
|
|---|
| |