Gene Rleg_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5197 
Symbol 
ID8007092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp608450 
End bp609109 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID644822106 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002973366 
Protein GI241113531 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.477284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.133192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAA CGGACGAGCA GCCGACACTG CGGGAAAAGG CGTATGAGAG CTTCACACGC 
CACCTTCTTG CGCGTGATGT GCGCCCCGGC CAGTTCGTTT CGCAGCGTCG CCTCGTCGAG
CTGACGGGGC TGACGCTTGG CGCTATCCGC GAACTTATCC CCCGGCTGGA AGCCGAAGGG
CTGATCAAGA CGGTGCCCCA GCGGGGGTTG CAGATTGCGC ATATCGACCT GAACCTTATT
CGCGAGGCAT TCCAGCTGCG CGTGTTCCTG GAGAAGGAAG CGGTCGCGCT TTTCACCCGT
TCTGCATCTG ACGAGACGAT CGCCGGGCTT TTGAAGCAGC ATCGGGATAT TGCGGACGCC
ATTCGAAATG GCGATGGATC GCACGAATTG GAAGTACACG CACAAGCTGT CGATTGGGGT
ATGCATGACG CCTTTATCGA TGCTTTGGGA AATACCATCA TCTCGAACGC CTACCGGGTG
AACTCAATCA AGATGCGCCT GATCAGTCAG GACCGTTTTC GTATCGATGG TCACGTCGGA
CCTGTCATGG GTGAGCACCT CAAGGTGCTC GAGGCGATCG AACGCCGATC GGCGGAGGAC
GCCGTCAACA GCCTTGTCGC ACACATCAAT CATGCAAGAG ATCGTGCGCT CAGGATATAA
 
Protein sequence
MDGTDEQPTL REKAYESFTR HLLARDVRPG QFVSQRRLVE LTGLTLGAIR ELIPRLEAEG 
LIKTVPQRGL QIAHIDLNLI REAFQLRVFL EKEAVALFTR SASDETIAGL LKQHRDIADA
IRNGDGSHEL EVHAQAVDWG MHDAFIDALG NTIISNAYRV NSIKMRLISQ DRFRIDGHVG
PVMGEHLKVL EAIERRSAED AVNSLVAHIN HARDRALRI