Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5197 |
Symbol | |
ID | 8007092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 608450 |
End bp | 609109 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644822106 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002973366 |
Protein GI | 241113531 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.477284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.133192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGAA CGGACGAGCA GCCGACACTG CGGGAAAAGG CGTATGAGAG CTTCACACGC CACCTTCTTG CGCGTGATGT GCGCCCCGGC CAGTTCGTTT CGCAGCGTCG CCTCGTCGAG CTGACGGGGC TGACGCTTGG CGCTATCCGC GAACTTATCC CCCGGCTGGA AGCCGAAGGG CTGATCAAGA CGGTGCCCCA GCGGGGGTTG CAGATTGCGC ATATCGACCT GAACCTTATT CGCGAGGCAT TCCAGCTGCG CGTGTTCCTG GAGAAGGAAG CGGTCGCGCT TTTCACCCGT TCTGCATCTG ACGAGACGAT CGCCGGGCTT TTGAAGCAGC ATCGGGATAT TGCGGACGCC ATTCGAAATG GCGATGGATC GCACGAATTG GAAGTACACG CACAAGCTGT CGATTGGGGT ATGCATGACG CCTTTATCGA TGCTTTGGGA AATACCATCA TCTCGAACGC CTACCGGGTG AACTCAATCA AGATGCGCCT GATCAGTCAG GACCGTTTTC GTATCGATGG TCACGTCGGA CCTGTCATGG GTGAGCACCT CAAGGTGCTC GAGGCGATCG AACGCCGATC GGCGGAGGAC GCCGTCAACA GCCTTGTCGC ACACATCAAT CATGCAAGAG ATCGTGCGCT CAGGATATAA
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Protein sequence | MDGTDEQPTL REKAYESFTR HLLARDVRPG QFVSQRRLVE LTGLTLGAIR ELIPRLEAEG LIKTVPQRGL QIAHIDLNLI REAFQLRVFL EKEAVALFTR SASDETIAGL LKQHRDIADA IRNGDGSHEL EVHAQAVDWG MHDAFIDALG NTIISNAYRV NSIKMRLISQ DRFRIDGHVG PVMGEHLKVL EAIERRSAED AVNSLVAHIN HARDRALRI
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