| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5088 |
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| Symbol | |
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| ID | 8007681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | + |
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| Start bp | 475785 |
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| End bp | 476870 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644822003 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002973263 |
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| Protein GI | 241113428 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.857117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0828727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAATC GTCTCAAAAT AGTCGCTCTG ATGATGGGTA CGGCCCTGAT CTCCTCCTGC
GCGCCGCAGG AGGAAAACAA GGAGGAAGCG CCCCGTCCCG TGCTGTCGAT GACAGTCAAG
CCGACGTCGG CCTCGAGCTT GAGCCTGACC GGTACGATCG AGCCGACGAT CGAGACCGAA
CTCGGCTTCC GGATTCTCGG GCGGATGATC GCCCGCAACG TCAATGTCGG CGATCTCGTC
AAGAAGAATG ACGTCGTTGC CGCCATCGAT CCGCTGGCGT TGGAGCTTGC CGTGCGCAAC
GCGCAGTCGG ACGTCGAGAA CAGCGACGCC CAGCTCAGGA ACGCGGTGAC CACGGAGCAG
CGCCAGCGCG CGCTGCTGGA GTCGCGCTCC GGCACCGAAG CCTCGCTCGA AGAGGCCGAG
CAGGCAAGGC GGACGGCGGC GGCCGCCGTC GCCAAGGCGC AAGCCAATCT CGACAAGGCC
AAAGAGCAAC TCGGTTACGC GCAGCTTCGG GCGGAGTTCG ACGGGGTGGT GACGGCGACC
TCGGCTGAGG TCGGACAGGT GGTGTCGGCC GGCCAGACGG TCGTGACCAT CGCACGGCCG
GACAAGCGCG ACGCCGTGGT TGACGTGCCC CAGGCCGCCG CCCAGAAACT GAAGATCGGC
GCACCCTTCG AAGTGACGCT GCAGCTTGAC CCGACCATCC GCACGTCGGG GACCGTGCGC
GAGATCGCCC CGGAGGCAGA GACCGCCACC CGCACGAGCC GGACCAAGAT CGAGCTGAGC
GATCCGCCCG AAGCCTTCAG GCTCGGCTCG GTCATCACGG CCTCGGCAAC CATTGCCGCC
GATCCGCAGA TCGTTCTGCC GTCCTCGGCA ATCCTTATCG GCAGCGACGG CCCGAGTGTC
TGGATCGTCG ATGCGCCGGC CGCCAAGGTA TCGCTTCGCC GCGTACAGAT CGACGGCGAC
GTCGAAGACG GCGGCAGCGT TCGCGTCACC GAGGGGCTCG CCCCCGGAGA AAGGGTGATC
GTGGCAGGCG TGCATAAACT TGAAGATGGC CAGGCCATCC GGATCGACCA GGAGATCAGC
CAGTGA
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| Protein sequence | MSNRLKIVAL MMGTALISSC APQEENKEEA PRPVLSMTVK PTSASSLSLT GTIEPTIETE
LGFRILGRMI ARNVNVGDLV KKNDVVAAID PLALELAVRN AQSDVENSDA QLRNAVTTEQ
RQRALLESRS GTEASLEEAE QARRTAAAAV AKAQANLDKA KEQLGYAQLR AEFDGVVTAT
SAEVGQVVSA GQTVVTIARP DKRDAVVDVP QAAAQKLKIG APFEVTLQLD PTIRTSGTVR
EIAPEAETAT RTSRTKIELS DPPEAFRLGS VITASATIAA DPQIVLPSSA ILIGSDGPSV
WIVDAPAAKV SLRRVQIDGD VEDGGSVRVT EGLAPGERVI VAGVHKLEDG QAIRIDQEIS
Q
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