Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5083 |
Symbol | |
ID | 8007676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 470319 |
End bp | 471470 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644821998 |
Product | ROK family protein |
Protein accession | YP_002973258 |
Protein GI | 241113423 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.122916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.209889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTATG ATCCGCTAGA CAATGTTGCC GCGCATTTTT TGCGAGACAC ACAACCGATG CGCGTGGCTT CCCGCAACGA GCGCGACCTG TTGCGGCTGA TCTGGAAGTC TCCGGGGATC GAACGCTCCG ACCTGACAGA GCCGCTCGAT CTCACCCAGC AATCGTTGCA CAGGATCGTC GCGCGGCTTC ATGAGCGAGG AATGCTGGTC TTTTCCCATT CGGAAACCCG GCGGCCGGGA CCGCCCAGCC CGGAGCTGAC CCTTCGCAAA GACTGGTGTT TAACCCTGGG CATCTCCGTG AATGTCGGTT CGATCGGCCT TTGCCTCATG GGTTTCGGCG AACCAATGGA AAACATGGAA ATTCCACAGG CGGGCTCCTC GCTATCCGAT GAAATGGAGC GGATCGAAGC GGCGGTCGAA GACATTCTTG CCCGCCGGGG CGCCAAACGG CGTGATGTCC TCGGCGTCGG TCTGGCCGTC GCCGGCCACC GCATGCTGGA GACGGCCTTC AATTGCCCCT TGCCGCTCGC TCATTGGTCG TTGATCGACC TGGCACCTTT GCTTGGAAAG CAACTTGGCC TGCCGGTCTG GGCAGACAAT GTCGCCAGGA CCGCAGCCTT GGCGGAAGCC ATTTTCGGCG TTGGCCGCGA TGTCGCAGAT TTCGCCTACA TCGCCCATCT TCATGGCTAT GGCGGCGGCC TGGTTTCCGG AGGCATGCCG TTTCGCGGCA ATTTCGGCAA CGCCGGCGAA TTTTCCGTTC TCTTCGGGCG TCAGGACTAC GAGGAACGCC CTGCACTCGG CGTCCTGCTT GAACATCTTC GTGCCAAAGG GCGCATGAAC TTGACCCTGA GGGACCTGAA GAACGAGGAC CTGATGGACT GGGATGGCGT TGGCGAGTGG GTCGACCGCG TCACGCCGGC CCACAATCGA GCCATCAATG CGATCTGCGC AATATTCGAC CCGGCATTGA TCGTCCTCGG CGGCGAGCTT CCGCACTCAC TCGCGAGAAT GCTGATCGAA CGGACCGAAT TCAACAATCT GCCTCGGCAT GGCGTTTTAC GCGACGTCCC CAGGCTTGAT GTGGCGCAGA TAATCGATGC CCCCGGCGCA ATCGGCGCGG CCTTGATCCC GCTCTTCGAA ACCGTTTTGT GA
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Protein sequence | MKYDPLDNVA AHFLRDTQPM RVASRNERDL LRLIWKSPGI ERSDLTEPLD LTQQSLHRIV ARLHERGMLV FSHSETRRPG PPSPELTLRK DWCLTLGISV NVGSIGLCLM GFGEPMENME IPQAGSSLSD EMERIEAAVE DILARRGAKR RDVLGVGLAV AGHRMLETAF NCPLPLAHWS LIDLAPLLGK QLGLPVWADN VARTAALAEA IFGVGRDVAD FAYIAHLHGY GGGLVSGGMP FRGNFGNAGE FSVLFGRQDY EERPALGVLL EHLRAKGRMN LTLRDLKNED LMDWDGVGEW VDRVTPAHNR AINAICAIFD PALIVLGGEL PHSLARMLIE RTEFNNLPRH GVLRDVPRLD VAQIIDAPGA IGAALIPLFE TVL
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