| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5001 |
|---|
| Symbol | |
|---|
| ID | 8007592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 384773 |
|---|
| End bp | 386098 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644821916 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002973176 |
|---|
| Protein GI | 241113341 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.58394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.404419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC CGCTCAATCG CGTCGACACC ACGCCGGAAC TGCCTTCCAC CGCTGATGTC
GTGGTCATCG GCGGCGGCAT CGTCGGCGTT TTCACGGCCT ATTATCTCGC CCGGCGCGGA
TTGAAGGTGG CCCTCGTCGA GAAGGGTCTG ATCGGCGCCG AACAATCGAG CCGCAACTGG
GGCTGGTGCC GCCAGCAGAA CCGCGACGCC CGCGAACTGC CGATGTCGAC GAAGAGCCTC
GACCTGTGGG AGCGCTTCGC CATTGAGACC GGGGAGGACA CCGGCTTCCA TCGTTGCGGC
CTCTTCTATC TCAGCAATAG CGACGAGGAA CTGTCCGGTT GGGCCCGCTG GCGCGATTTC
GCCCGCTCGG TCGGCGTCAC GACGCATATG CTGAACAGCG CCGAGGCAAC CGAACGCGGG
CATGCCACCG GCACTTCATG GAAAGGCGGG GTGTTTTCGC CGACCGACGG CACCGCCGAT
CCGGCGAGCG CTGCACCGGC CGTCGCGCGT GCGATCCTGA AACTCGGCGG CACGGTGCAT
CAGTCCTGCG CGGCCAGAGG CCTCGACGTC GAAGGCGGCC GGCTCTCGGG CGTCGTCACC
GAGCATGGCA CGATCCGGAC AAAGATCGCC GTCCTCGCCG GTGGTGCCTG GGCCTCCTCC
TTCTGTCGTC AGCTCGGCAT TCGATTTCCG CAAGCCTCGA TACGCTCCTC GATCCTCGCC
GTATCTCCAG GCGCGAGCGG CCTGCCGGAT GCGCTGCATA CATCAGCCGT TTCGGTAACG
CGGCGCCGCG ATGGTGGTCA CACGCTCGCG ATCAGCGGCC GCGCCCGTGT CGATCCGACG
CCACAGCAGT TCCGCTTCGC GCGGCAATTC CTGCCGATGT TCGCCCGGCG CTGGCGCAGT
CTCGCACCAG GCGGGCTGGA GGGCTTTCGC TCCGGCCACG AATCTCTGGC CCGCTGGCGG
CTCGACAGAC CGACGCCAAT GGAGCGCATG CGAATCCTCG ACCCGACGGT CGACGAGGCC
ACCATCGCGC TTACGCGTGC GCGGGCGCTC GAGCTTCTCC CTGCCTTGAA GAAAACCGCC
ATCAGCGCGA CTTGGGCCGG CTATGTCGAC AGCACGCCCG ACGGCGTACC AGGGATCGGC
GAGATCGCCA CCTTGCCCGG TTTCATCCTC GCTGCCGGCT TCAGCGGCCA CGGCTTCGGC
ATCGGGCCTG GCGCCGGTCA TCTGATTGCC GATATCGTCA CCGGCGATGA GCCGATCGTT
GATCCGAGAC CCTACCACCC CGACCGCTTC GGTGGATCCG CCTGGGGCAA AGTGGCCGAT
TTTTAG
|
|---|
| Protein sequence | MPAPLNRVDT TPELPSTADV VVIGGGIVGV FTAYYLARRG LKVALVEKGL IGAEQSSRNW
GWCRQQNRDA RELPMSTKSL DLWERFAIET GEDTGFHRCG LFYLSNSDEE LSGWARWRDF
ARSVGVTTHM LNSAEATERG HATGTSWKGG VFSPTDGTAD PASAAPAVAR AILKLGGTVH
QSCAARGLDV EGGRLSGVVT EHGTIRTKIA VLAGGAWASS FCRQLGIRFP QASIRSSILA
VSPGASGLPD ALHTSAVSVT RRRDGGHTLA ISGRARVDPT PQQFRFARQF LPMFARRWRS
LAPGGLEGFR SGHESLARWR LDRPTPMERM RILDPTVDEA TIALTRARAL ELLPALKKTA
ISATWAGYVD STPDGVPGIG EIATLPGFIL AAGFSGHGFG IGPGAGHLIA DIVTGDEPIV
DPRPYHPDRF GGSAWGKVAD F
|
|---|
| |