| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4977 |
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| Symbol | |
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| ID | 8007568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | + |
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| Start bp | 356424 |
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| End bp | 359720 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644821892 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002973152 |
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| Protein GI | 241113317 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0199806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ATCATCTCAG CATGAAGCCG ATCGCCCGCA GCGGTGGCCG CAGTGCTGTC
GCGTCCGCCG CCTATCGTGC GGCCGAGCGC CTCACCAACG AGCGCGATGG GCTGACCCAT
GATTTTAGCA ACAAAACAGG TGTCGAGCAT GCCGAGATCG TCTTGCCGGC TGGTTCTTCT
GCTTACTGGG CGATGAAGCG ATCGGCCTTG TGGAATGCCG CCGAGCGTGC CGAGAAGCGC
AGCGATGCCC GTATTGCCCG GGAATTCGAA ATCGCCCTGC CGCACGAATT GAGTTCCGAC
CAGCGACTGG CGCTGACGCG GGCCTTTGCC GAAGATCTCG CCAACCGCTA CGGCGCTGCC
GTCGACTTCG CGATCCATCG GCCAGGTGAG GGAAGCGATA TCCGCAACAG CCACGCGCAT
CTGATGATGA CGACGCGTGA GGTGAGGGAA ACCGGTCTTG GCGACAAGAC GCTGCTCGAG
CGGGAGAACA GATGGCTTCT CGCCAATCAC CTGCCGCCAT CGCAACTGCA GCTGAAGGAT
CTCAGACAGG CGTGGGAGCA TCTTGCCAAC ACGCACCTTG AGAGGGCCGG CCACGATATC
CGTATCGACA ACCGTTCGCA TCTGGAAGCC GGGATCACGA TCGAGCCGAG CGAACATGTC
GGTGTGCATG CCACTCAGAT CAATCGGCAG GGTGGAATGG TCTCGCGCGT CCGCATCTCA
CCGCAATCGG CCGATCGCAA TGCCGAGACC ATTCGCCGGC GGCCCGAAGA GATATTGAAG
CTCATCACCA ACGAGAAAAG CGTCTTCAAC CGTTATGATA TCGCCAGGGC CCTGCATCGC
ACCATCAACG ACGATGCGCA GACCTTCCAG AATGCTTTTG CCGCGGTCAT GGCGTCGAAG
GCACTTGTCG AGCTCAGACC CGACAGTTCA AGCCTTCGCG GTCGTGACGG CGAGGCACGC
TATTCGACGG TCGAGATGGT GGCGATCGAG GGTGCGATGG CAACAGCCAC TGTTGCGATG
AAGACGCGCC AAAACCACGG TGTGGCGAAG CGCAATGTCG ATGCGGCCAT CGCCGATCAG
GACAGATCGA TCCAGGCGGG AAATCCTTCA CCGGGGCAGG GACTATCGGC GGAACAGCGC
CAGGCGATCG AGCATGTCAC CGGCGCCTCG CAGATCGCCG TGGTGATCGG CTTTGCCGGT
GCCGGCAAGA GCACGATGCT GGCAGCTGCC CGCCAGGCCT GGGAAGCGCA AGGTTATCGC
GTTCATGGCG CGGCATTGGC CGGCAAGGCC GCGGAAGGCC TGGAGCAATC GTCCGGCATA
TCGAGCCGCA CCTTGGCGTC CTGGGAGTAC TCCTGGCAGG CTGATCGGGG TCGGCTGAAT
GCTCGTGACG TCTTCGTCAT CGACGAGGGC GGCATGGTCG GAAGCCGGCA GCTCGCCCGC
TTCGTCGACG AGGTCAGACG GGCCGGCGCC AAGCTCGTCC TGGTCGGAGA TCATGAACAG
CTTCAGGCGA TCGGAGCGGG CGCGCCGTTT CGGGCGATTG CCGAAGCCGT CGGCCATGCG
CAATTGTCGG AAGTGCGCCG GCAAAGAACC GATTGGCAAA AGCAGGCTTC GATCGACTTC
GCATCTCACC GGACTGCCGA CGGGCTTGCT GCCTACCAAG CACATGGCAA CATCCAGCTG
AAAGCAAACC GCGACGACGT GCTGAAGGCG ATCATTGCCG ATTACGTCGC TGACCGATCG
GCCAATCCCA ACGACACGCG CATTGCGATG GCCCATCGAC GCGACGACGT CCGTGCCATC
AATGCCGGCA TTCGCGCTCG GTTGCAGGAG CGCGGTGAGC TGGCAACGGG CAGCAACCCG
TCTGACGATA AAGGTGAGGA ACTCACCTAC CAGACCAACA ATGGGAAGCG ATCCTTCGCA
CGCGGCGATC GCATCGTCTT CCTGGAGAAC GATCGTGATC TCGGCGTCAA GAATGGCATG
CTGGGCGAGG TGATCGCCGT CCAACCGGAC GCAATACAGG TTCGGCTTGA CGGCAAGGCG
CCGACGCAAG ATGGGCAACG CCAGGTGATC ATTCCGGTGA ACAGTTACCA GGCCTTTGAT
CACGGCTACG CGACGACGAT CCACAAGACG CAAGGGGCTA CCGTCGACCG GAGTTTTGTT
CTCGCGTCGA CGACGATGGA CCGGCATCTG ACCTACGTGG CGATGACCCG TCATCGCGAG
GCGGTACAGC TCTATGCCAG CCTCGATGCG TTCAAGACGG AGCGCGCCCT GACAGAGGCA
CTGAGCCGCT CAGGCGTGAA GGAGACGACG CTCGACTATA CCCATGACTT TGCCAATCGG
CGCGGCATGG AGGATCGCCA AGGGCAGGGC GAGAGCGAGG TCGCACCTGC GGTAATCACC
AAGGAGGCGG AGCGCATCGC GGACACGACG GTTCCCAAGC CAATGCAAGA ACCACGGCCG
CCGACACCGC TCGCGGCCCG CACCATCGCC GATGGCGGCT CTTCGCACCA GGATCCCAAT
GTCGATGAAC GTCGCGATGA ACGCCGCGTG CTCGTTGCGG CCGTGAAGAC CTATGCGATG
AGCGTCGAAG AGGTTGGGCG GTCAAGGGCA ATGCTGGCAT TCAAACGAGA TTGGGACGCG
GCAAAGCAGC TTGCGCCGCA GGTGTTCAAC GACGCGCCAG CGGCCATGGA CGTGTTGCGC
GGCCGCATCC TGGATGAGAA TGCAGATCCG GTTGCGCTCG CCGGACAACT CAGCACTTTG
CCCGAGACGA TCGGTGCGCT CGCCGGCAAG ACCGGCCTGT TCGGAGACAA CGCCGAACGC
AAACACGCGC TTTTGCGGAT CGATGCGCTG GCCTCGCATG TTCGCCAATC CGCCAACACC
TGGCAACGTC GCCTCGCGGC TGAATGCGGC TCCGAACGCT GGAAGCGGGA AAAGCAGGAC
GTCGTCGAGG TTCTGGGGCC GAGCCGCCGG AGCGAAGCGC TGCTGCGCCA GCTCGACGAT
CTGCCTTATA CGGACAAGGC CAAGTTCGTC GAGCGACTGG CCGGGACACC GGAGGGGCGT
CAAGCGCTTG CCGAGGCAAA GGACATCGCT ACTGCGATCG AAACGCGCTT CGGTCGCGCC
GATCCCTCAG ATCTCGCGGA TCAGCTGAAG CGCGTGGGAC CGGATCGGGA TGGTGATATC
GAGCGTATCC GCCAGGTTGC TCGCCTTGCC GATCGTAGTC ATCGTGCGGA GCTCACCCAG
CAGATGGAGT TGAAGCGGTC GCTGAAGCGG GGCAAGTCCT TGGGGCTTGG GATGTAG
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| Protein sequence | MAIYHLSMKP IARSGGRSAV ASAAYRAAER LTNERDGLTH DFSNKTGVEH AEIVLPAGSS
AYWAMKRSAL WNAAERAEKR SDARIAREFE IALPHELSSD QRLALTRAFA EDLANRYGAA
VDFAIHRPGE GSDIRNSHAH LMMTTREVRE TGLGDKTLLE RENRWLLANH LPPSQLQLKD
LRQAWEHLAN THLERAGHDI RIDNRSHLEA GITIEPSEHV GVHATQINRQ GGMVSRVRIS
PQSADRNAET IRRRPEEILK LITNEKSVFN RYDIARALHR TINDDAQTFQ NAFAAVMASK
ALVELRPDSS SLRGRDGEAR YSTVEMVAIE GAMATATVAM KTRQNHGVAK RNVDAAIADQ
DRSIQAGNPS PGQGLSAEQR QAIEHVTGAS QIAVVIGFAG AGKSTMLAAA RQAWEAQGYR
VHGAALAGKA AEGLEQSSGI SSRTLASWEY SWQADRGRLN ARDVFVIDEG GMVGSRQLAR
FVDEVRRAGA KLVLVGDHEQ LQAIGAGAPF RAIAEAVGHA QLSEVRRQRT DWQKQASIDF
ASHRTADGLA AYQAHGNIQL KANRDDVLKA IIADYVADRS ANPNDTRIAM AHRRDDVRAI
NAGIRARLQE RGELATGSNP SDDKGEELTY QTNNGKRSFA RGDRIVFLEN DRDLGVKNGM
LGEVIAVQPD AIQVRLDGKA PTQDGQRQVI IPVNSYQAFD HGYATTIHKT QGATVDRSFV
LASTTMDRHL TYVAMTRHRE AVQLYASLDA FKTERALTEA LSRSGVKETT LDYTHDFANR
RGMEDRQGQG ESEVAPAVIT KEAERIADTT VPKPMQEPRP PTPLAARTIA DGGSSHQDPN
VDERRDERRV LVAAVKTYAM SVEEVGRSRA MLAFKRDWDA AKQLAPQVFN DAPAAMDVLR
GRILDENADP VALAGQLSTL PETIGALAGK TGLFGDNAER KHALLRIDAL ASHVRQSANT
WQRRLAAECG SERWKREKQD VVEVLGPSRR SEALLRQLDD LPYTDKAKFV ERLAGTPEGR
QALAEAKDIA TAIETRFGRA DPSDLADQLK RVGPDRDGDI ERIRQVARLA DRSHRAELTQ
QMELKRSLKR GKSLGLGM
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