Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4963 |
Symbol | |
ID | 8007556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 345038 |
End bp | 345742 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644821880 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002973140 |
Protein GI | 241113305 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.16936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTGTT GCAAGAACGA GCCCCCACGT CGCGGGGTCG ATTCAAATTT TGACATTGAA CCAGAACCTG CAAAGGCCGA TATTGCCTAC GATGCTATTC GACGATTGCT CCACAGTTAC GGTCGTGTGC CGGAGCAACA TCTCAGGGAA CAGGATCTGG CGTCTAAGCT CGATATTGGT CGAACCCCAG TTCGCGAAGC ACTTCAACGG CTAGCAGCGG AAGGAAAGAT CCAATACATC CCTCAAAGAG GTTTTTTCAC GAGACCGATG TCAGAAAATA CACTGTTGGA TTTTTACGTT GTTGGACGCG AGACCCTCAT TTCGGCCTTA AATCGAATGC GGCCGCAGGT ACCAGAGAGC TGGAGCGTGT CGGACAAATT GTCCCCTGAC GAACTCGCCT TAAGGGCAGA AGCGATCTTC TCTAAAATCG CCGAGGAAGC GGCCAATTGT GAGGCCTGCA AAATCGTCCA CCGATTCTGT TTTTGTACTC ACCCTCTACG AATGGAAATA ACCGCGTCCG ATCTTCGGCC CGCGTTTGTC AAAAGTCTCG GAAGACTAAG TGCCGCAATG TCTGAACTAG GCATGGCAAC GGACCGGGCG CAGTCCGCGT TGATGAACCA CCTTGATCTA GAACAGGGTG CCGTCTCAAG GATCGTACAA GAGGTGAACG AACGTGGACT AACAGGATTT TCTCGCCCCG CGTGA
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Protein sequence | MRCCKNEPPR RGVDSNFDIE PEPAKADIAY DAIRRLLHSY GRVPEQHLRE QDLASKLDIG RTPVREALQR LAAEGKIQYI PQRGFFTRPM SENTLLDFYV VGRETLISAL NRMRPQVPES WSVSDKLSPD ELALRAEAIF SKIAEEAANC EACKIVHRFC FCTHPLRMEI TASDLRPAFV KSLGRLSAAM SELGMATDRA QSALMNHLDL EQGAVSRIVQ EVNERGLTGF SRPA
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