| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4799 |
|---|
| Symbol | |
|---|
| ID | 8007483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 168750 |
|---|
| End bp | 169478 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644821729 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002972989 |
|---|
| Protein GI | 241113154 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.117848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC TCTCCATCCG CGACCTCGAC GTCCGCCACG GCCTGCTTCA GGCGGTGCGC
GGCGTCAGCT TCGATCTTGC CAGGGGCGAG GTGCTGGCGC TGGTCGGCGC AAATGGCGCC
GGTAAGACAA CGCTGCTCAG ATCGATCGCC GGCGCTCATC TCCCATTCTC CGGCCGCGTC
CTCCTCAACG ACGAAGATCT GGCCGCCGTC CCCTCCCACA AACGGATCGC CAAGGGCATC
GCCCTCGTTC CGGAAGGCCG GCGCCTGTTT TCACAGATGA CGGTGGAGGA AAACCTGCTT
CTCGGAAAGA CTTCCGGCCG CAAGGGCGAG TGGAGTATCG ATCGTGTCCT CGACGCCTTT
CCGAACCTGA AACCCCGCCG TCACGCCAAA ACAGGACACC TCTCGGGCGG CGAACAGCAG
GCAACCGCCA TCGGCCGGGC GCTGATGAGC AATCCCGATA TTCTTCTCCT GGACGAGGTC
TCGCTCGGGC TTTCGCCTCT GGTCGTCGAC CGCGTCTATG CCCAGCTGCA GGCCTTGCTC
ACCTCGGGAA CGACCATCGT GCTCGTCGAG CAGGATCTCG CCCGCGCCAT GAGCGTCGCA
AGCCGTGTCA TCTGCATGCT GGAAGGACGC ATCGTCCTCG ACCGGCCGGC AGCCGCCGTC
ACGCGTGAAC ACGTCACTCA AGCCTATTTC GGATTGCACC GGGCAGCCGG CGAAAGGAGC
GCATCGTGA
|
|---|
| Protein sequence | MSLLSIRDLD VRHGLLQAVR GVSFDLARGE VLALVGANGA GKTTLLRSIA GAHLPFSGRV
LLNDEDLAAV PSHKRIAKGI ALVPEGRRLF SQMTVEENLL LGKTSGRKGE WSIDRVLDAF
PNLKPRRHAK TGHLSGGEQQ ATAIGRALMS NPDILLLDEV SLGLSPLVVD RVYAQLQALL
TSGTTIVLVE QDLARAMSVA SRVICMLEGR IVLDRPAAAV TREHVTQAYF GLHRAAGERS
AS
|
|---|
| |