| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4772 |
|---|
| Symbol | |
|---|
| ID | 8007025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 143624 |
|---|
| End bp | 144331 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644821702 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_002972962 |
|---|
| Protein GI | 241113127 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.100134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATG GCATTGTCTC CGAGATCGGC AACCCCGATC GTAAAACGAA TCTAAGCCTG
ACGCTTCGCA GACGCATCCT GACGATGGAA CTGCCGCCGG GTGCGGTGTT GGACGAAGTG
GCGCTGAGCG AGGAGTTTGG GCTGTCCCGC CCGCCGGTTC GCGAGCTGAT GCGACAGATG
GCTGGCGAAG GTTATATCGA ACTGGAAGCC AACCGTGCGG CGCGCGTCAG TTCGATGAGC
TACCAGTCGC TGCATGACTT CTTCCTTCTT GCGCCGATGA TCTACATCAC CGCCAACAAG
CTGGCAGCCG AGAACGGAAC GCGCGGGCAG CTCGACGTGC TCAAGCAGGT TCAGCAATCA
TTTCGAAAGG CCGTCGACAA TTGCGACGTC GAAGGGCGCG TCTTCTACAA CGACCAGTTC
CACCGCCAGA TCGGTGAGAT GGCGCACAAC GTCTATCTGG TTCCGAGCCT GCGGCGACTG
CAGATCGACC ATGCGCGCAT CGGCAAGGTT TTCTACAAGC ACCCGAACAC GCCTCGCATG
CAGGAAGAAC TCGAGCTCGC CACGCAACAA CATGATGAGA TGATCGAAGC CATCGGGAAA
CGCAATCCCG ACGCAGCCGG AGAACTGGCG CGGCTTCACC TCGAGCTTTC ACGACGAAAC
ATGGCCATGT ACGCGGCCCC AGAGGGTCTG GAGACGCCGA CCCTCTAG
|
|---|
| Protein sequence | MDDGIVSEIG NPDRKTNLSL TLRRRILTME LPPGAVLDEV ALSEEFGLSR PPVRELMRQM
AGEGYIELEA NRAARVSSMS YQSLHDFFLL APMIYITANK LAAENGTRGQ LDVLKQVQQS
FRKAVDNCDV EGRVFYNDQF HRQIGEMAHN VYLVPSLRRL QIDHARIGKV FYKHPNTPRM
QEELELATQQ HDEMIEAIGK RNPDAAGELA RLHLELSRRN MAMYAAPEGL ETPTL
|
|---|
| |