Gene GWCH70_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3437 
Symbol 
ID7979509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012794 
Strand
Start bp592 
End bp1845 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content46% 
IMG OID644800200 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002951339 
Protein GI239828716 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000548211 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTG ATATTTCTTG TCTACCAAAA AATAAAATTT TATGTATCGA TATGAAGAGC 
TTCTATGCCA GCTGCGAATG CGTCGATCAC GGACTGGATC CTCTTGAGGA TTATGTCGTC
GTTGTCTCTG ATAAAAATCG AAGTGGGAGC GTGGTTCTGG CCGCGTCTCC GAAAATGAAG
CAAGATTACG GAATCAAAAC AGGAAGCCGT CTATATGAAG TACCTCGCCG TCGCCATATC
CATATTTTTA ACGCCCGTAT GAAGCGGTAT TTGGAAATCA GCGTTCAAAT TACAGAGCTG
TTTTCCACCT TTGTCCCTTT TGAAGCGATT CTCACGTACA GCGTTGATGA GAGCTGGATA
ACCCTAGACG GTACGGAAAA ACTACATGGA TCTCCAATAG AAGCGGCTCA AAAAATACGC
AACGCGATCT GGAATCAATT CGGTCTGCCA TCTTGCATTG GTATCGGACC GAACCGTTTC
ATCAGCAAAG TCGTGCTTGA TGTATACGCC AAAAAACAAG GCATTACGGA ATGTACGTAT
GAAGAAGTAC CGAAAAAATT ATGGCCAGTT CCATTACGGG AAATCTGGGG CATTGGCAGC
CGAATGGAGA AACATTTGAA CAATATGGGA ATGTACACGC TTGGAGACGT GGCAAACAGT
TCCCTAGATC GCTTACGGAA ACGGTTTGGC GTAATAGGAG AGCAGCTTTA CTATCATGCT
TGGGGAATTG ACTTAAGCCC TCCTTTTATC GACGCAAGGA CCTTCCCTCA AAAAAGTATC
GGAAAAGGAA TTACATTACT GCGCGACTAC TGGAGGGAAA ACGAAATTTT AACGGTTGTG
TTGGAACTTT GTGAGGAAGT AGCAAAACGG GCGCGTGAAA TCGGGAAAGT AGGACGTACC
GTTTCATTTA GCGTGCGCTA TTCTCATAAC GAAGGAGGAT TCCATCAGTC CGTCACCCTT
GATACAGCCA CAAACTTAAC AATGGACATC TACCGCGTTT GTAAGCGGAT TTTCCATAAG
TTTTATGACG GACGAAGCGT GCGCGTCATT CATGTATCCC TTGAAAACTT GATGGATGAG
GAAAGTTTGC AGCTGTCCCT TTTTGAAGAC AGAACAAAAG AACGCGCCCT TGCCAAAGCG
ATGGACGCGA TCCGCGATAA ATTTGGTCCC AACGCGCTAT TGCGTGCCGT CAGTTACACG
CCTGGAAGCG TCGCCCGCAT CCGCAACAAC TATATAGGAG GGCATCAGGC ATGA
 
Protein sequence
MLFDISCLPK NKILCIDMKS FYASCECVDH GLDPLEDYVV VVSDKNRSGS VVLAASPKMK 
QDYGIKTGSR LYEVPRRRHI HIFNARMKRY LEISVQITEL FSTFVPFEAI LTYSVDESWI
TLDGTEKLHG SPIEAAQKIR NAIWNQFGLP SCIGIGPNRF ISKVVLDVYA KKQGITECTY
EEVPKKLWPV PLREIWGIGS RMEKHLNNMG MYTLGDVANS SLDRLRKRFG VIGEQLYYHA
WGIDLSPPFI DARTFPQKSI GKGITLLRDY WRENEILTVV LELCEEVAKR AREIGKVGRT
VSFSVRYSHN EGGFHQSVTL DTATNLTMDI YRVCKRIFHK FYDGRSVRVI HVSLENLMDE
ESLQLSLFED RTKERALAKA MDAIRDKFGP NALLRAVSYT PGSVARIRNN YIGGHQA