| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3376 |
|---|
| Symbol | |
|---|
| ID | 7977132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3402627 |
|---|
| End bp | 3403052 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644800143 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_002951282 |
|---|
| Protein GI | 239828658 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000866739 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTG ATGACATGAT TGAAGCGATT AACGAGCAAT GGACCGATAT TTATTACTCA
CTGCACTATG TAAACAAGGA CAATCTTACA CATCAAGCCA TTCGTTTGTT GCAGTATATT
GAAAAAAATG GAGAGGCGAC AATTGGAGAT TTAGCAAAGC ATTTGGCAGT ATCTCATAAC
ACGACCTCCG AACATACAAA GCGGTTGATA AAAAAAGGCC TGGTTAGTAA AAAAAGAGGC
AGCCTTGATG AGAGGAAAGT ATTTGTTGTG TTAACGGAGA AAGGAAGACA TATCTTATAT
CGGCATACCC GATTAGACAA AGACAAACTA AAAGAAGTTT TCAAACAAAT GGATGAATCT
GATTTAGAAC TCATACAAAA AGCGTTTACC ATTCTTAGTG AGGGAGCGAA AAAATGTTTG
CGCTAG
|
|---|
| Protein sequence | MQIDDMIEAI NEQWTDIYYS LHYVNKDNLT HQAIRLLQYI EKNGEATIGD LAKHLAVSHN
TTSEHTKRLI KKGLVSKKRG SLDERKVFVV LTEKGRHILY RHTRLDKDKL KEVFKQMDES
DLELIQKAFT ILSEGAKKCL R
|
|---|
| |