Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3313 |
Symbol | glyA |
ID | 7977079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3336683 |
End bp | 3337918 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644800080 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002951219 |
Protein GI | 239828595 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000728494 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTACT TGCCACAACA AGATCCGCAA GTATTTGAAG CGATTCAAAA TGAGTTGAAA CGGCAGCAAT CAAAAATTGA ATTAATCGCG TCAGAAAATT TTGTCAGCCG CGCTGTTATG GAAGCGCAAG GATCGGTATT AACGAATAAA TATGCTGAAG GATATCCGGG CCGCCGCTAT TATGGTGGCT GCGAATATGT CGATGTCGTC GAGGATCTCG CGCGCGAACG GGCGAAAAAA TTGTTTGGCG CGGAACATGC CAACGTACAG CCGCATTCTG GCGCACAAGC GAACATGGCG GTATATTTTA CTGTTTTGGA ACATGGCGAT ACGGTGCTTG GGATGAATTT GTCGCACGGC GGTCATTTAA CGCATGGCAG CCCAGTCAAC TTTAGCGGCA TTCAATATAA CTTTGTCGAA TATGGTGTCG ATCCAGAAAC ACATGTCATT GATTATGATG ATGTGCTTGA AAAAGCGCGC ATACATAAGC CGAAACTGAT TGTAGCAGGG GCAAGCGCTT ATCCGCGCAT CATCGATTTT AAACGTTTCC GTGAAATCGC TGATGAAGTA GGGGCGTACT TGATGGTAGA CATGGCGCAC ATTGCAGGTC TTGTTGCGGC AGGTCTTCAT CCAAATCCGG TGCCATATGC GCATTTTGTG ACCACAACAA CGCATAAGAC GCTCCGCGGG CCGCGCGGCG GCATGATCCT TTGCAAAGAA GAGTTTGCAA AACAAATTGA CAAAGCGATC TTCCCAGGCA TTCAAGGCGG ACCGCTCATG CACGTCATCG CGGCGAAAGC AGTCGCGCTC GGTGAAGCAC TGCAAGACAG CTTTAAAACA TATGCGCAAA ATATCATCAA CAACGCAAAA CGCCTCGCGG AAGCATTGAA AAAAGAAGGC TTTACACTCG TTTCCGGCGG AACAGACAAC CACTTGTTGT TAATTGATTT ACGTTCCCTT GGCCTCACTG GAAAAGTGGC GGAAAAAGTG TTGGACGAAG TCGGTATCAC CGTCAACAAA AATACGATTC CGTACGATCC GGAAAGCCCA TTTGTGACAA GCGGCATCCG TATCGGCACC GCCGCGGTAA CGACGCGCGG ATTCGGTTTG GAAGAAATGG ATGAAATCGC AAGCATTATT AGTCTTACAT TAAAACATCA CGAAGACGGA GCAAAATTGG AAGAAGCGCG AAAACGCGTA GCGGCATTAA CGGAAAAATT CCCATTATAT CGTTGA
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Protein sequence | MNYLPQQDPQ VFEAIQNELK RQQSKIELIA SENFVSRAVM EAQGSVLTNK YAEGYPGRRY YGGCEYVDVV EDLARERAKK LFGAEHANVQ PHSGAQANMA VYFTVLEHGD TVLGMNLSHG GHLTHGSPVN FSGIQYNFVE YGVDPETHVI DYDDVLEKAR IHKPKLIVAG ASAYPRIIDF KRFREIADEV GAYLMVDMAH IAGLVAAGLH PNPVPYAHFV TTTTHKTLRG PRGGMILCKE EFAKQIDKAI FPGIQGGPLM HVIAAKAVAL GEALQDSFKT YAQNIINNAK RLAEALKKEG FTLVSGGTDN HLLLIDLRSL GLTGKVAEKV LDEVGITVNK NTIPYDPESP FVTSGIRIGT AAVTTRGFGL EEMDEIASII SLTLKHHEDG AKLEEARKRV AALTEKFPLY R
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