Gene GWCH70_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3313 
SymbolglyA 
ID7977079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3336683 
End bp3337918 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content48% 
IMG OID644800080 
Productserine hydroxymethyltransferase 
Protein accessionYP_002951219 
Protein GI239828595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000728494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACT TGCCACAACA AGATCCGCAA GTATTTGAAG CGATTCAAAA TGAGTTGAAA 
CGGCAGCAAT CAAAAATTGA ATTAATCGCG TCAGAAAATT TTGTCAGCCG CGCTGTTATG
GAAGCGCAAG GATCGGTATT AACGAATAAA TATGCTGAAG GATATCCGGG CCGCCGCTAT
TATGGTGGCT GCGAATATGT CGATGTCGTC GAGGATCTCG CGCGCGAACG GGCGAAAAAA
TTGTTTGGCG CGGAACATGC CAACGTACAG CCGCATTCTG GCGCACAAGC GAACATGGCG
GTATATTTTA CTGTTTTGGA ACATGGCGAT ACGGTGCTTG GGATGAATTT GTCGCACGGC
GGTCATTTAA CGCATGGCAG CCCAGTCAAC TTTAGCGGCA TTCAATATAA CTTTGTCGAA
TATGGTGTCG ATCCAGAAAC ACATGTCATT GATTATGATG ATGTGCTTGA AAAAGCGCGC
ATACATAAGC CGAAACTGAT TGTAGCAGGG GCAAGCGCTT ATCCGCGCAT CATCGATTTT
AAACGTTTCC GTGAAATCGC TGATGAAGTA GGGGCGTACT TGATGGTAGA CATGGCGCAC
ATTGCAGGTC TTGTTGCGGC AGGTCTTCAT CCAAATCCGG TGCCATATGC GCATTTTGTG
ACCACAACAA CGCATAAGAC GCTCCGCGGG CCGCGCGGCG GCATGATCCT TTGCAAAGAA
GAGTTTGCAA AACAAATTGA CAAAGCGATC TTCCCAGGCA TTCAAGGCGG ACCGCTCATG
CACGTCATCG CGGCGAAAGC AGTCGCGCTC GGTGAAGCAC TGCAAGACAG CTTTAAAACA
TATGCGCAAA ATATCATCAA CAACGCAAAA CGCCTCGCGG AAGCATTGAA AAAAGAAGGC
TTTACACTCG TTTCCGGCGG AACAGACAAC CACTTGTTGT TAATTGATTT ACGTTCCCTT
GGCCTCACTG GAAAAGTGGC GGAAAAAGTG TTGGACGAAG TCGGTATCAC CGTCAACAAA
AATACGATTC CGTACGATCC GGAAAGCCCA TTTGTGACAA GCGGCATCCG TATCGGCACC
GCCGCGGTAA CGACGCGCGG ATTCGGTTTG GAAGAAATGG ATGAAATCGC AAGCATTATT
AGTCTTACAT TAAAACATCA CGAAGACGGA GCAAAATTGG AAGAAGCGCG AAAACGCGTA
GCGGCATTAA CGGAAAAATT CCCATTATAT CGTTGA
 
Protein sequence
MNYLPQQDPQ VFEAIQNELK RQQSKIELIA SENFVSRAVM EAQGSVLTNK YAEGYPGRRY 
YGGCEYVDVV EDLARERAKK LFGAEHANVQ PHSGAQANMA VYFTVLEHGD TVLGMNLSHG
GHLTHGSPVN FSGIQYNFVE YGVDPETHVI DYDDVLEKAR IHKPKLIVAG ASAYPRIIDF
KRFREIADEV GAYLMVDMAH IAGLVAAGLH PNPVPYAHFV TTTTHKTLRG PRGGMILCKE
EFAKQIDKAI FPGIQGGPLM HVIAAKAVAL GEALQDSFKT YAQNIINNAK RLAEALKKEG
FTLVSGGTDN HLLLIDLRSL GLTGKVAEKV LDEVGITVNK NTIPYDPESP FVTSGIRIGT
AAVTTRGFGL EEMDEIASII SLTLKHHEDG AKLEEARKRV AALTEKFPLY R