| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3235 |
|---|
| Symbol | |
|---|
| ID | 7977149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3270118 |
|---|
| End bp | 3270429 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644800012 |
|---|
| Product | transcriptional regulator, AbrB family |
|---|
| Protein accession | YP_002951151 |
|---|
| Protein GI | 239828527 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCTA TGGGGTTTGC AGACCACCAA CCAAATGTTG TGGTAAAGGC AACAAGCAGG
TTATCTAGTC GTGGACAAGT CGTAATTCCG ATTGAAATAC GGAAGACCCT GGGTCTCACA
GAGGGTGATG ATTTAACATT CATTTTAAAT AAGGATGGCG AAATTAAGGT GGAAGTCGTA
AAGAAGCAAC GTGTATCGGA ATTACTCGGC ATTCTAAAAA CAAATAAGCC CTTTCAACCA
GTTGATGAAA TCCGGAAAGA AGTATATCGG AACATGGCGG AGAAGGAGTT AAAGGACAGG
GAGGAAGATT AA
|
|---|
| Protein sequence | MGAMGFADHQ PNVVVKATSR LSSRGQVVIP IEIRKTLGLT EGDDLTFILN KDGEIKVEVV
KKQRVSELLG ILKTNKPFQP VDEIRKEVYR NMAEKELKDR EED
|
|---|
| |