Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3215 |
Symbol | |
ID | 7977062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 3249369 |
End bp | 3250976 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644799997 |
Product | zinc finger SWIM domain protein |
Protein accession | YP_002951136 |
Protein GI | 239828512 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0504166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCAGA CCGCAATCTC CAAACCTCTG TTGCAAAAAG CCGCTGCCGA CTTGCAGCGG GAATGGCCGT TTTCTCTCTT CCAACATGTC ATCCAAAAAG GGCGGGAATT GTCACGGCAA GGGTTGGTGT ATAACGTCAC GGTCATAGAC AGCGATTTTA TCGAAGGAAA AGTCATCGAC ACCGCCATTC ATGACGTGAC GCTTGATTTG TCGGACATCT CCCTCCACAG CTGCACATGC GGGGCGGAAG ATCTTTGTCC GCACGTACTG GCGCTGTTCT TTTACGTGTA CGGAAATGTA TTTGACAACG GCGAGTTGTT GCGGCAATGG AAACAAGGAA AGAAAAAACC GAACCGGAAA GCGGCATCGG TCCAAACACC GTCTGAACCA AACACAGCGG AATCGGTCGC CCAATGGCGG AAGCAGTTCG CCGACCTATT GGACGAGTGG AGCGCCCGCC ACCGCCGCCG CAATGATTGG CCGTACCGCT TGTCCCATCA ACTGTTTCCG CGACTCGTCA AAAACAGCCC GAAACACAGC GCTGTCCGTT TGTTGCATCG CTTTCATGCG GCCTTGTTTT TGCTTGACCA TTTGTTCGAA TACGGACGCG AACGCGGTTG GGACCGTGGG CTGTTGTTCG GATCATACGA GCAGTTTTCG TGGCAACAAG ACGTCGATTA TATCGCCGAC GAATGGTTCG AAACGTTGGA ACGGTTTCCG TCCGAACTGC TGCCCCCGTC TGTTGAAACG CACATCGAAC AGACGATCCC GTATGTACGG GAGTTGTTGC TGCGGTGGGG AAAGGCGTCC CCTTCACTCG TCTACAGCCT ATACACAACC GCTTGGGAGC TGCTGTTCAC GAAAGAAGCG CAGCGCCGGC AAGAGAAAGA AACGCTGATC CGCCTGGCAA CGGAAAAACA GTCAACCACT CTGTTGCTAG CTGCCGCCCA TCTCGCCTTT TTACTCGGCG AAGATGACGA AGCGCTCGCC ATCTACCGCC AACATCCCAA GGAAGCGGCT CCGTTTTTTA TCGATTGGAT GGAGCGGTTC GCATCCTCGC ATTCGCCGGA ACGTTTCGCA TCATTTTGGG CGAAAGGAAA GCAAGAGCTT GCCTTCTACA TATCCGCTCT TCCAGAGATG GAGCGGTCGC CGTTTGTCAA CGAAATCGGT CGGCTGTACG AATCATACGC TCGCCAACAC AACAAATGGG ACGACTATGA GAAGCTGTTG GCCGCATGCT TCCCATACAG CGCGAACCGC TACGTTCATT GGCTGCTCGA TCAAAGGCGC TACCATGATG TAGTCGACTT ATACTTATGG GTGGACGCCA CCGCCCATGA CATTGATCCA ACATTTCTCG CCATGCTGCA AAAACAAAAC CCGGCGCTCG TCTTGCCATT GTATCACCGA GCGGTCATGC GTTTTGTCGA GGCGAAAAAC CGCGCAAGCT ATCGCGTCGC CGTGCAATAT TTAAAAAAAT TGCGTGCGTG CTACCGATCG TTGAAACGAA TGAACGACTG GCAGATGTAT CTTGAACAGC TGTTAGCCAA AACAGCGCGC ATGCGCGCGT TTCATGAAGA AGTGGAGAAA GGAAAATTGC TTCTATGA
|
Protein sequence | MLQTAISKPL LQKAAADLQR EWPFSLFQHV IQKGRELSRQ GLVYNVTVID SDFIEGKVID TAIHDVTLDL SDISLHSCTC GAEDLCPHVL ALFFYVYGNV FDNGELLRQW KQGKKKPNRK AASVQTPSEP NTAESVAQWR KQFADLLDEW SARHRRRNDW PYRLSHQLFP RLVKNSPKHS AVRLLHRFHA ALFLLDHLFE YGRERGWDRG LLFGSYEQFS WQQDVDYIAD EWFETLERFP SELLPPSVET HIEQTIPYVR ELLLRWGKAS PSLVYSLYTT AWELLFTKEA QRRQEKETLI RLATEKQSTT LLLAAAHLAF LLGEDDEALA IYRQHPKEAA PFFIDWMERF ASSHSPERFA SFWAKGKQEL AFYISALPEM ERSPFVNEIG RLYESYARQH NKWDDYEKLL AACFPYSANR YVHWLLDQRR YHDVVDLYLW VDATAHDIDP TFLAMLQKQN PALVLPLYHR AVMRFVEAKN RASYRVAVQY LKKLRACYRS LKRMNDWQMY LEQLLAKTAR MRAFHEEVEK GKLLL
|
| |