Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_2844 |
Symbol | |
ID | 7978057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2872139 |
End bp | 2873128 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644799633 |
Product | integrase family protein |
Protein accession | YP_002950792 |
Protein GI | 239828168 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCAAGGC GTAATAATAA TTTATCCCCT GATGAAATTT TTGAAATGCA CACAAATTCT ATACAATCTG ATGCTATTGA TTTTCAAATA GCGTTAGAAA AATTCCTTGA AGATTGCGAA ATACGGAATT GTCGTCCTCA AACTATTCAA TATTACAGAA ATGAATTGTC TGTATTCTAT AAAATTCTTC GTGAACAAGG GATTGAAGTT AATATTTACA GAATGACACC CGAAATCATT AAACAGAATG TCATTTTGTA CATGAAAAAT CAGAAGAATT GTAAAACAGT AACGATCAAT ACTCGGCTGC GTGCATTAAG AGCGTTTTTT AACTTTCTTG AACGAGAAAA AATCATTTCT AAAAAACAAA ATCCTTTTCA TGAAATCAAA TTACTTAAAG ACCGTAAAAA AGCAGTGCCG ACTTTTACAA AAGAAGAAAT TCATATCCTT TTTAAACAAC CAAATTTAAG GACTTTCACT GGCGTAAGAG ATTTAACAAT AATGATGCTC CTTTTAGAAA CAGGGATACG AGCAAGTGAA TGTGTCGGGA TTCGATTAGG CGACATAGAT TTTCAGCGTT CACGAATCTT AATTCAAAAT ACAAAAGGTT ATAGGCAACG ATATGTACCG ATTCAGAAGC AAATGAAAGA GCAGTTAAAA AAATATTTAG CAATTCGTGG CACATTAGAT CATGATTATC TATTTGTTTC TGTTGATGAT ACTCCTTTAA CAAAACGACA AATGCAGGCG CAAATTGAAT CGTACGGAAA GAAATGTGGT ATCCATGCGA CTTGCCATAA ATTCAGACAT ACCTTCGCAC GGCTTTCTGT TGAAGCAGGT GCTGGAATCT TCGAACTTCA AGCCGTTCTA GGACATTCTT CAATGGAAAT GGTGAAACAT TACGTCAATC TATTTTCTGA CGATGTAGTT GAAAAGCATA AATCATTTTC GCCGATAGAA AATGTTTTTT CAAATAGAAG AAGGAGATGA
|
Protein sequence | MARRNNNLSP DEIFEMHTNS IQSDAIDFQI ALEKFLEDCE IRNCRPQTIQ YYRNELSVFY KILREQGIEV NIYRMTPEII KQNVILYMKN QKNCKTVTIN TRLRALRAFF NFLEREKIIS KKQNPFHEIK LLKDRKKAVP TFTKEEIHIL FKQPNLRTFT GVRDLTIMML LLETGIRASE CVGIRLGDID FQRSRILIQN TKGYRQRYVP IQKQMKEQLK KYLAIRGTLD HDYLFVSVDD TPLTKRQMQA QIESYGKKCG IHATCHKFRH TFARLSVEAG AGIFELQAVL GHSSMEMVKH YVNLFSDDVV EKHKSFSPIE NVFSNRRRR
|
| |