Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_2787 |
Symbol | |
ID | 7978006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2822962 |
End bp | 2823324 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644799582 |
Product | Phage-related holin (Lysis protein)-like protein |
Protein accession | YP_002950741 |
Protein GI | 239828117 |
COG category | [R] General function prediction only |
COG ID | [COG4824] Phage-related holin (Lysis protein) |
TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGT ATGCGTTGAT GTTTGGCATT TCGTTAGTTG GGTCGTTCGT TTCATTTCTA ATTGGAAGCA TGGACTCATT GGTAATGATT TTACTTTGTT TTGTGATAGC AGACTATGTA ACAGGACTGA TCGCTAGCGC TATTGAAGGA AGATTGTCAA GTCAAGTCGG ATTTCGCGGC ATTGTCCGTA AGCTGCTTAT TTTTGTTTTA GTGGCTGTTT CCCATTTATT AGAGATCGCG ACGCGATTGG CTGGAACAAT CATTTTATTC GTGATGCGAT TATCTTTTTT TATATCACAA ATGAATTCAT CTCCATTGTT GAAAATGAAG GAAGAGCAGG TGTTCCGATT CCATCCTTTT TAA
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Protein sequence | MQKYALMFGI SLVGSFVSFL IGSMDSLVMI LLCFVIADYV TGLIASAIEG RLSSQVGFRG IVRKLLIFVL VAVSHLLEIA TRLAGTIILF VMRLSFFISQ MNSSPLLKMK EEQVFRFHPF
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