| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2634 |
|---|
| Symbol | |
|---|
| ID | 7978297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2669784 |
|---|
| End bp | 2670323 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644799435 |
|---|
| Product | Colicin V production protein |
|---|
| Protein accession | YP_002950594 |
|---|
| Protein GI | 239827970 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000105324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATC TTCTTTTGCT CTTTATCCTT TTAATGGGGT TTATGATTGG TCTAAAACGG
GGATTTATTT TGCAATTTAT TCATATGGCC GGCTTTATCA TCGCTTTTGT CGTCGCTTAT
CTTTATTATG AAAAATTAGT GCCGCCGCTG CGTCTGTGGA TTCCGTATCC GACGTTCGGC
GCCCCGGAGA CGGCCAAACT GCTGTTTGAA AGCACGCATT TGGATGAAGC ATACTATCGA
GCGATCGCAT TTGCGATTTT ATTCTTCGCA ACGAAAATTG TGCTGCAAAT CATCGGTTCG
ATGCTTGATT TTGTGGCGCA ATTGCCGATT CTTCGCAGCA TTAACCGCTG GGCTGGCGGA
GCGTTGGGAT TTATCGAAGT GTACTTAATC GTATTTTTAC TTTTATACGT TGGTGCGCTT
ATCCCAATTG AAAGCATACA AACGAAGCTT CAACATTCTT TTATGGCAAT GGTGATTGTG
AAGCACACTC CGTTTTTGTC TGATATGTTG AAGCAAATGT GGATTCATTA TATGGCATAG
|
|---|
| Protein sequence | MVDLLLLFIL LMGFMIGLKR GFILQFIHMA GFIIAFVVAY LYYEKLVPPL RLWIPYPTFG
APETAKLLFE STHLDEAYYR AIAFAILFFA TKIVLQIIGS MLDFVAQLPI LRSINRWAGG
ALGFIEVYLI VFLLLYVGAL IPIESIQTKL QHSFMAMVIV KHTPFLSDML KQMWIHYMA
|
|---|
| |