| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2556 |
|---|
| Symbol | |
|---|
| ID | 7976320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2580442 |
|---|
| End bp | 2581395 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644799357 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002950517 |
|---|
| Protein GI | 239827893 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
|---|
| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGT TTACGCTGTT TCAGCCAAGG CATAAAGTCG CGAATCTAGT AATAAAAGAC
CATGTCATTC GATATGTAGA GACAAAGCCA AACGACCCAT TATCCGTTCA TAAATGGGGA
GAGCACCAGC TTGCCAAAGG GATTGTTCAT GACGGAAAAA TTATTGATCG CGAAACGTTG
GAAATGATTT TAGAAGAATG CGTGGACGAG TGGAAATTAA AAAAACGCCG CGTTCGTTTC
ATTGTGCCAG ATCCCTTCGT TATTATTCGT CGAATTCCGC TTCCTGCTGA TTTGGAAGAA
GATGAAATTC GCAGTTATTT GTTTATGGAA TTAGGAACAA CGATTCCGTT GCCGTTTGAT
AATCCGGTGT TTGACTACAT TGTTTTGGAA AAGACGCAGG AAGCGACCGC TGTTTTGTTA
TTCGCTGCTC CAGAAGATTC GGTGTTAAGT TATGCGCAGC TTTTAGAAGA TGTAAAACTT
CGCCCGATAG CTGCGGATGT TTCTCCACTA TGCGCATATC GTCTTTTTTA TATGGCCGAT
CAAGTGAAGA AAGACGATCA TATTTTGCTT ATTCAGTTTG ATCAATCTTC TGTCAATGTT
AGCGCATTTG ATGAACATAA ACCTGTTTTT ATGCGCCATC TTTTGCTGGA GCAGTATGAA
GAAATAAATA TGGAGAAAGA TCAACAGCTC GTTGATCCGT TTGAAGATAT ATATAAAGAA
ATGGAACGGA TGATGAGTTT CTATTCCTTT TCCATCCATC AAGGAAAACA GCAAATTACC
CGTGTATTTC TAATGGGGGA TCATCCGCGT TTGTCCCGTG TTTATCAAGC GCTGCAAGAA
CGGCTGGACG TTCCTGTAGA ACAGCTTTCG GCTGCGATGG CAAGTGCAGT GGATGCGCGC
TATCATCTCG CATGGGGACT TGGGCTAAAA GAGGGAAATG ACGATGATCG TTGA
|
|---|
| Protein sequence | MNMFTLFQPR HKVANLVIKD HVIRYVETKP NDPLSVHKWG EHQLAKGIVH DGKIIDRETL
EMILEECVDE WKLKKRRVRF IVPDPFVIIR RIPLPADLEE DEIRSYLFME LGTTIPLPFD
NPVFDYIVLE KTQEATAVLL FAAPEDSVLS YAQLLEDVKL RPIAADVSPL CAYRLFYMAD
QVKKDDHILL IQFDQSSVNV SAFDEHKPVF MRHLLLEQYE EINMEKDQQL VDPFEDIYKE
MERMMSFYSF SIHQGKQQIT RVFLMGDHPR LSRVYQALQE RLDVPVEQLS AAMASAVDAR
YHLAWGLGLK EGNDDDR
|
|---|
| |