Gene GWCH70_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1965 
Symbol 
ID7978926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp2026639 
End bp2027412 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content47% 
IMG OID644798792 
Productprotein of unknown function DUF990 
Protein accessionYP_002949962 
Protein GI239827338 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000288504 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGTA AATACATCGC CCTTCTGCGC ATGAAATATG TCGAAATGTT AGCTTATCGC 
CTCGCAACGA TTGTTTGGAT GACAGGAGCG ATTGTCCAGC CGCTCATTAC GATGGTCGTC
TGGATGAATA TCGACCCGTC CCAATCGGAC GCGTTCATTT TTTATTTTAT GGCCGTTATT
TTCGTAGAGC GCATGACGAG CGCGTGGGAC GTTTGGGAAC TCGACCATGA GATTCGCGAT
GGGACATTTT CCAACTATAT TATTCGCCCG CTCCATCCGA TTCATTGGGC CATTGCGGAA
AACATCGTTT ATAAAGTGTT GTTTCTCGTC ATATTAGTGC CGATATGGAC GGTGGCAACG
CTGTTTGTGC CCGCGCTTCG CTTTGACGTG ACAGGCGGAC AGGCGCTTCT GTTTTTGACG
GCGGTGCTAG TTGGCGCGGC GCTTCGCTTT TTGCTCAGTT ATGCTTGCGG CCTGCTTGGT
TTTTGGATTA CGAAAGTAAC GGCAGTATAT AGTTTGCTCG AAGTGATTTC TTTGTTTTTG
TCAGGGCGGA TTGCGCCGTT GTCGATGTTG CCGCCGCTAT TGCAGCAGTG GAGCGTCTTT
TTGCCGTTTC GCTATATGAT TGGCTTTCCG ATTGACATTA TTACAGGAGC GATAAATCAA
AAAGAAATAA TGACCGGTTT TTGGATTGCG TTCATTTGGG TTGTTTTGTT TATTATTGCC
GTGCAATGGT TATGGAAAGC GGGATTAAAG AAAAATCAAG CGGTAGGTGG GTAA
 
Protein sequence
MIRKYIALLR MKYVEMLAYR LATIVWMTGA IVQPLITMVV WMNIDPSQSD AFIFYFMAVI 
FVERMTSAWD VWELDHEIRD GTFSNYIIRP LHPIHWAIAE NIVYKVLFLV ILVPIWTVAT
LFVPALRFDV TGGQALLFLT AVLVGAALRF LLSYACGLLG FWITKVTAVY SLLEVISLFL
SGRIAPLSML PPLLQQWSVF LPFRYMIGFP IDIITGAINQ KEIMTGFWIA FIWVVLFIIA
VQWLWKAGLK KNQAVGG