Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1948 |
Symbol | |
ID | 7978772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2007435 |
End bp | 2008190 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644798776 |
Product | LamB/YcsF family protein |
Protein accession | YP_002949946 |
Protein GI | 239827322 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000410312 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTTG ATTTGAATTG CGATTTTGGC GAAAGCTTTG GAATATATCG CCTCGGCGAG GAAAAAGAGA TTTTGCAGTA TGTCACATCG GTCAATGTCG CTTGCGGCTT TCATGCCGGA GATCCGCTTG TGATGCGGAA AACGGTGCAG ATGGCATTAG AGCAAAAAGT CGCGATCGGC GCGCATCCAG GGTTTCCGGA CTTGCTTGGA TTCGGCCGGC GCAACATCGC GGTAACTCCA GAAGAAGCGT ATGCGTATGT TGTTTATCAA ATTGGGGCGC TCGCTGCGTT TGTGAAAGCG GAAGGAGGGA AGATGACGCA CGTCAAGCCG CACGGCGCCC TTTATAACAT GGCGGCGAAA GACACGGCGC TGGCGGAGGC GATCGCCAAA GCGGTGTACG ATGTCGATCC AACCTTAATT CTGTACGGAC TTGCCGGAAG CGAGCTGATT CGCGCCGGAA AGAAAATCGG CTTGCGGACG GCAAGTGAGG TATTTGCCGA TCGAACGTAC CAACAAGATG GTTCATTGAC ACCAAGAAGC GACCCGCGCG CGTTGATTGT CGATGAACAG GAAGCGGTTC TTCAGGTGCT TGCCATGGTG AAAGAAAAAC GCGTCCGCTC TTTGCAAGGC ATCGATGTTC CGATTGAAGC GGAGACGATT TGCATTCACG GGGACGGTAA GAAAGCGGTG CTGTTTGCGC AGCGGTTATA TGAGGCGCTG CAGAAGGAAG GCGTGGATGT TTGTTCTATA AAATGA
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Protein sequence | MRVDLNCDFG ESFGIYRLGE EKEILQYVTS VNVACGFHAG DPLVMRKTVQ MALEQKVAIG AHPGFPDLLG FGRRNIAVTP EEAYAYVVYQ IGALAAFVKA EGGKMTHVKP HGALYNMAAK DTALAEAIAK AVYDVDPTLI LYGLAGSELI RAGKKIGLRT ASEVFADRTY QQDGSLTPRS DPRALIVDEQ EAVLQVLAMV KEKRVRSLQG IDVPIEAETI CIHGDGKKAV LFAQRLYEAL QKEGVDVCSI K
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