Gene GWCH70_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1855 
Symbol 
ID7976476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand+ 
Start bp1921001 
End bp1921657 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content42% 
IMG OID644798689 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_002949859 
Protein GI239827235 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00309398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGATG CCCACCTTCA TTTAGATCAA TATAGCGATA TCGAAGAAGA GATAAAAAAA 
TGGCAAGAAG CAGGAATTGC CGCGGTAGTG GCCGTTTCGA CCGATCTTCG TTCCAGCTAT 
CGGACGCTCG AACTAAAACA AAAATTTCCT GATTTCATTT ATGCGGCGAT TGGGTTTCAT 
CCCGAACAGC CTCTTCCATC ATCATTAGAA TGGGAAGAAT GGCTTCGTCT TCTTCAGATC 
GAACGCCCAC ATCTTTCTGC TATTGGAGAA GTCGGTCTTC CTTATTATTC TGCTGAAGCT 
GTTTTACGAT TTTCTGATTA TCGCGATTTC TTTGAACAAA TCGTTCGTAC TGCTGCTGCG 
GCCTCATTAC CGCTAGCAAT ACACGCTGTT TACGACAAAG CTTCAACTGC TTTACATATA 
TTGCAGAAAA ATAAGATAAA AAAGGCTCAC TTTCACTGGT TGAAAGCGGA GCCGGCGATC 
ATTGAGAGAA TTGTAGCATG CGGCTACTTT ATTTCAATCA CTCCTGAAGT TTGTTATCGC 
ACGCGGGACC AAAAACTTTT GTCCCGTGTG CCAATCAAAC AATTGCTTTT AGAGACGGAT 
ATATCTTTTA TTGCGATCAT TCCGATTTTG CATTTAGAAC AATGTGTGAC TAAATAA
 
Protein sequence
MIDAHLHLDQ YSDIEEEIKK WQEAGIAAVV AVSTDLRSSY RTLELKQKFP DFIYAAIGFH 
PEQPLPSSLE WEEWLRLLQI ERPHLSAIGE VGLPYYSAEA VLRFSDYRDF FEQIVRTAAA 
ASLPLAIHAV YDKASTALHI LQKNKIKKAH FHWLKAEPAI IERIVACGYF ISITPEVCYR 
TRDQKLLSRV PIKQLLLETD ISFIAIIPIL HLEQCVTK