Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1449 |
Symbol | |
ID | 7976898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1518353 |
End bp | 1519108 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644798358 |
Product | polysaccharide deacetylase family sporulation protein PdaB |
Protein accession | YP_002949531 |
Protein GI | 239826907 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB [TIGR02884] delta-lactam-biosynthetic de-N-acetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCAAAT GGTTAATCTT GATCATAGGT TGTTCTCTTG TTCTGTCATT TATTTGGAAA ATACCTATAA CAGCGAATAA TCATAAAGGA CGAAGTTATT TTGAAGAACA AGGAAGAGCA ATCTGGGAAG TGCGAACCAA AGAGAAAGTT ATTGCATTGA CCTTTGATGA TGGGCCAAGT CCGACATATA CCCCACAAAT TCTAGATGTT TTAAAACAAT ATCAGGCCAA GGCAACTTTT TTTGTAGTTG GTTCCCGTGT AAAAGATCAC CCCGATTTAG TAAAACGTCA AATTTTGGAG GGCCATGAAT TAGCAAATCA TACATACAAT CACGCCAATT TCAGAGGGCT CACCGAAGAA GAAATTAGAC AAGAATTAAG AAAAACAAAA CAACTTATTG TTGAGTTGAC TGGATTTTCT CCGAAATTTT TTCGCCCGCC AGGAGGGTAT TATAATGAAA CCATCATTAA TGTCGCCAAC CAAGAAGGCT ATACCGTTGT AATGTGGTCA TGGCATCAAG ATACCTATGA TTGGAAGCAG CCGGGTGTCA GTAAGATTGT AAAAAAGGTT TTGTCTAATG CTCGAAACGG AGATATTGTC TTATTTCATG ATTACGGAGG GGATCGTCGC CAAACGATCG AAGCGCTTAA GCAAATTTTG CCTGAACTTA AAAAAAGAGG ATACAAATTT GTCACCATAT CCGAATTGCT AAAAATGCAT CCAAACTATA AATATCTCGA TTGGATGCCA GAATGA
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Protein sequence | MFKWLILIIG CSLVLSFIWK IPITANNHKG RSYFEEQGRA IWEVRTKEKV IALTFDDGPS PTYTPQILDV LKQYQAKATF FVVGSRVKDH PDLVKRQILE GHELANHTYN HANFRGLTEE EIRQELRKTK QLIVELTGFS PKFFRPPGGY YNETIINVAN QEGYTVVMWS WHQDTYDWKQ PGVSKIVKKV LSNARNGDIV LFHDYGGDRR QTIEALKQIL PELKKRGYKF VTISELLKMH PNYKYLDWMP E
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