Gene GWCH70_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1444 
Symbol 
ID7976893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand+ 
Start bp1513621 
End bp1514298 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content35% 
IMG OID644798354 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002949527 
Protein GI239826903 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0101817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG AGGTGTTAAA ATTGTATTCA GCATTTGAAA AGCAGCCTAA AGAGAAAAAA 
GACTTGATCA TCAAAGTGGC CATCGAGGAA TTTGTGAAGA ATGGTTATGA AAAGACCTCT 
ACAGATGTTA TTACGAGACG GGCGGGAATT TCCAAGGGAA TCCTTTTTCA TTATTTTAAG 
AGCAAGAAAA ACTTATACCT TTATTTAGTG AATTATGTGA AGGACTTTCT GACGGAACTA 
GCAATGGAAG AAATGAAAAA AATCCAATCT GATGATTTCT TTGAAAGGAT CAAAGAAATC 
GTCCTGTTGA AACAAAAACT AACGGTTCAG TATCTCCAAG AAACTCAGTT TATTACGGAT 
GCCTTTACTA ATCCTCCAGT GGCAGTAAAG AAGGAAATGG AAGAAATTAT TAAGAAACAT 
TACGAAGCTT ATCAGGAAGA TTTTTTGCTG AAGCATGTCT ATATTAAAGA TCTGATCCAA 
ACGGAAAAAC TTAGAGAGGA TATTTCCGTG GATACCGCGA TCCGCATGAC CATGTTGATT 
GCCGAACAGC TGTCTAATAA GTATATGGCT ATATACAAAA ATAAGCAAAT GGATGTCATG 
AGTGGTGTGG AGTCTTTGAT AAGGGAACTG AATGAATATC TTAAGATTAT TAAATATGGA 
ATCTATAAAC CAGAATAG
 
Protein sequence
MKLEVLKLYS AFEKQPKEKK DLIIKVAIEE FVKNGYEKTS TDVITRRAGI SKGILFHYFK 
SKKNLYLYLV NYVKDFLTEL AMEEMKKIQS DDFFERIKEI VLLKQKLTVQ YLQETQFITD 
AFTNPPVAVK KEMEEIIKKH YEAYQEDFLL KHVYIKDLIQ TEKLREDISV DTAIRMTMLI 
AEQLSNKYMA IYKNKQMDVM SGVESLIREL NEYLKIIKYG IYKPE