| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1426 |
|---|
| Symbol | |
|---|
| ID | 7976877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1495071 |
|---|
| End bp | 1496195 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644798343 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002949516 |
|---|
| Protein GI | 239826892 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0313349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT ACATCGTCGT TGGAGGCGGG ATTTTAGGAG CGTCTACCGC TTATCACTTG
GCAAAAGAAG GAGCTGCTGT AACGCTAATA GACAGAGGTG ACAAAGGCCA AGCAACAGAT
GCTGCGGCTG GAATTGTTTG TCCATGGGTT TCCCAGCGTC GAAATAAGCG TTGGTATCGT
TTAGCGAAAG GCGGAGCGAG ATTTTATCCC GCTTTAATCG AAGAACTGAA ATTCTATGGT
GAAACGGAAA CGGGATATGA GCGTGTAGGA GCAATCTGTC TTCATACAGA TGAAGAGAAG
CTTCAAAAGA TCAAGGAAAG AGTATTACAA CGTCGTGAGG ACGCACCAGA AATCGGCGAA
ATTACGCGAT TGTCTCCCGA GGAAACAAAA GCACTATTTC CGCCATTGGC AGAGGAGTAT
AGCTCCATTC ATGTCAGTGG CGCCGCTCGC GTCAATGGAA GAGCACTTCG CAACTCCTTA
GTTCGGGCAG CGCAAAAGCT TGGAGCTGCT TATATCAAAG GAAACGCAAA ACTTATCCAT
AAAGGTGCAC AAGTAATCGG TGTCGAAGTA GAAGGAAGAC AATATGTAGG AGATGCCGTC
ATCGCAACGT CTGGTGCGTG GTCAAAAGAG CTGCTTCTAC CGTTAGGCAT TGAATTTTTA
GTGGTGCCGC AAAAAGCGCA AATCGTTCAC CTTGAAAGAC CAGAACAGGA TACAGACAAT
TGGCCCGTTG TCATGCCGCC AAATAATCAA TATCTCCTTG CCTTTAAAGA TGGTCGTATT
GTCATCGGAG CCACTCATGA AGATGAGGTT GGCTTCGATT GCAGAGTAAC GGCTGGTGGA
TTGCATGAAG TTTTAGACAA AGCTTTAACC GTAGCTCCAG GGCTGGCGAA TTGTACTCAT
CTTGAAACAA GAGTTGGTTT TCGTCCATAC ACTCCTGGGT TTCTTCCGGT CTTTGGAGCG
CTTCCAGGTT TCGAAGGCAT CTATGTGGCC AACGGATTAG GCGCATCCGG ACTGACAGCT
GGTCCTTACT TAGGTTCTGA ACTGGCAAAG CTCGTACTCG GAAAACCAAC AGAATTAGAC
CCTTTGGACT ATGATGTCGC TGGCGCCATT AAGAAAATAG AATAA
|
|---|
| Protein sequence | MKSYIVVGGG ILGASTAYHL AKEGAAVTLI DRGDKGQATD AAAGIVCPWV SQRRNKRWYR
LAKGGARFYP ALIEELKFYG ETETGYERVG AICLHTDEEK LQKIKERVLQ RREDAPEIGE
ITRLSPEETK ALFPPLAEEY SSIHVSGAAR VNGRALRNSL VRAAQKLGAA YIKGNAKLIH
KGAQVIGVEV EGRQYVGDAV IATSGAWSKE LLLPLGIEFL VVPQKAQIVH LERPEQDTDN
WPVVMPPNNQ YLLAFKDGRI VIGATHEDEV GFDCRVTAGG LHEVLDKALT VAPGLANCTH
LETRVGFRPY TPGFLPVFGA LPGFEGIYVA NGLGASGLTA GPYLGSELAK LVLGKPTELD
PLDYDVAGAI KKIE
|
|---|
| |