Gene GWCH70_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1353 
Symbol 
ID7978155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp1424006 
End bp1424488 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content39% 
IMG OID644798289 
Producttranscription activator effector binding 
Protein accessionYP_002949462 
Protein GI239826838 
COG category[S] Function unknown 
COG ID[COG3708] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.266351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA AAGTTATTGA AAGAGATAGT TTTCAAGTAG TAGGAATCAA GCGAGAATTT 
TCATTAGTTA ATGGGGAGAA TCTTGTAGAT ATTCCAAAAC TGTGGGATGA AGTTAATGAG 
GATGGAACAG TCGATTTATT ATGGAAGTTG AACAATGGTC AAATTAAAGG TGTGCTGGGG 
GTATGTGTCA CTAATAGCGG TACACAGTCG AAGCAAGTAA TGGATTATTG GGTAGCCACA 
GAATATGATG GTGACACCCC CAACGGATTA TTGAAATTTG AAGTGCCCGC ATCTAAATGG 
GTTGTATTTG AAGTTCATGG GCCAATGCCA GATGCTATGC AGAAGGCATG GAACCAAATT 
TTTTCAGAAT GGCTTCCATC CAGTAGTTAT GAGCATGCAG GCACACCAGC ATTAGAAGTA 
TATACAGACG AAAATCCCTT GAGCCCTGAT TTTTATTCCG AAATCTGGAT ACCAGTAAAA 
TAA
 
Protein sequence
MKYKVIERDS FQVVGIKREF SLVNGENLVD IPKLWDEVNE DGTVDLLWKL NNGQIKGVLG 
VCVTNSGTQS KQVMDYWVAT EYDGDTPNGL LKFEVPASKW VVFEVHGPMP DAMQKAWNQI 
FSEWLPSSSY EHAGTPALEV YTDENPLSPD FYSEIWIPVK