Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0832 |
Symbol | |
ID | 7979331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 897991 |
End bp | 898728 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644797806 |
Product | putative RNA polymerase sigma factor SigI |
Protein accession | YP_002948979 |
Protein GI | 239826355 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02895] RNA polymerase sigma-I factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGCA TATTATTTTC ATTAAAGAAG GAGAGAACGA TTGAGCAAAC AGTTCATGAA ATTCAACAAG GAAATAAAGT ATTGCATAAT CAATTAATTC AACAATATAA ACCTTTTATT GCCAAGACGG TTTCAAATGT GTGCAAACGA TTTATTCACG AAGGGGATGA CGAACTAAGC ATCGGTTTAA TCGCATTTAA TGAAGCCATT GAAAAATACG CACCTCATAA AGGAGGTTCG TTTATTTCTT TTGCCGAACT GCTTATTAAA AGGCGCTTAA TCGATTACAT TCGTAAAGAA GCAAAAGAGA AGAACATTAT TTTACATACA AATGAAGATG AGGAAAATTC AGCCCAAACA TACTTGGATA CGAAATTATC CATGGATGAA TTTTACAAGC AAGTGGAGCA AGAACATCGT CGCGAAGAAA TTATTCATTA TCAACAAGTG TTAAAGGAAT TTGGGATTCA TTTTCATGAC CTTATCGAAC AGTCGCCAAA ACATAAAGAT GCGCGAATAA ATGCGATTAA TGTCGCTAAA TTGTTAGTTG AAGATGAGGA AATGCTCGAA TGGCTTTTTC GAAAAAAGCA ATTACCGATT AAACAACTGC AAAATATTGC CGAAGTAAGC CGAAAAACGA TAGAGAGAAA TAGAAAATAT ATTATTGCGG TGGCGATTAT TTTAGCTGGG AATTATGTTT ATTTAAAGGA TTATATAAAA GGGGTGCTTC CATCGTGA
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Protein sequence | MFSILFSLKK ERTIEQTVHE IQQGNKVLHN QLIQQYKPFI AKTVSNVCKR FIHEGDDELS IGLIAFNEAI EKYAPHKGGS FISFAELLIK RRLIDYIRKE AKEKNIILHT NEDEENSAQT YLDTKLSMDE FYKQVEQEHR REEIIHYQQV LKEFGIHFHD LIEQSPKHKD ARINAINVAK LLVEDEEMLE WLFRKKQLPI KQLQNIAEVS RKTIERNRKY IIAVAIILAG NYVYLKDYIK GVLPS
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