Gene GWCH70_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0832 
Symbol 
ID7979331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp897991 
End bp898728 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content34% 
IMG OID644797806 
Productputative RNA polymerase sigma factor SigI 
Protein accessionYP_002948979 
Protein GI239826355 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02895] RNA polymerase sigma-I factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGCA TATTATTTTC ATTAAAGAAG GAGAGAACGA TTGAGCAAAC AGTTCATGAA 
ATTCAACAAG GAAATAAAGT ATTGCATAAT CAATTAATTC AACAATATAA ACCTTTTATT
GCCAAGACGG TTTCAAATGT GTGCAAACGA TTTATTCACG AAGGGGATGA CGAACTAAGC
ATCGGTTTAA TCGCATTTAA TGAAGCCATT GAAAAATACG CACCTCATAA AGGAGGTTCG
TTTATTTCTT TTGCCGAACT GCTTATTAAA AGGCGCTTAA TCGATTACAT TCGTAAAGAA
GCAAAAGAGA AGAACATTAT TTTACATACA AATGAAGATG AGGAAAATTC AGCCCAAACA
TACTTGGATA CGAAATTATC CATGGATGAA TTTTACAAGC AAGTGGAGCA AGAACATCGT
CGCGAAGAAA TTATTCATTA TCAACAAGTG TTAAAGGAAT TTGGGATTCA TTTTCATGAC
CTTATCGAAC AGTCGCCAAA ACATAAAGAT GCGCGAATAA ATGCGATTAA TGTCGCTAAA
TTGTTAGTTG AAGATGAGGA AATGCTCGAA TGGCTTTTTC GAAAAAAGCA ATTACCGATT
AAACAACTGC AAAATATTGC CGAAGTAAGC CGAAAAACGA TAGAGAGAAA TAGAAAATAT
ATTATTGCGG TGGCGATTAT TTTAGCTGGG AATTATGTTT ATTTAAAGGA TTATATAAAA
GGGGTGCTTC CATCGTGA
 
Protein sequence
MFSILFSLKK ERTIEQTVHE IQQGNKVLHN QLIQQYKPFI AKTVSNVCKR FIHEGDDELS 
IGLIAFNEAI EKYAPHKGGS FISFAELLIK RRLIDYIRKE AKEKNIILHT NEDEENSAQT
YLDTKLSMDE FYKQVEQEHR REEIIHYQQV LKEFGIHFHD LIEQSPKHKD ARINAINVAK
LLVEDEEMLE WLFRKKQLPI KQLQNIAEVS RKTIERNRKY IIAVAIILAG NYVYLKDYIK
GVLPS