Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0691 |
Symbol | |
ID | 7978871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 758009 |
End bp | 759361 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644797676 |
Product | MATE efflux family protein |
Protein accession | YP_002948850 |
Protein GI | 239826226 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCG ATCAGAAAAA GCTTTCCTTA TTTGCGCTGA CATGGCCGAT TTTTATTGAA ACGCTATTAT ATATGGTCAT GGGAAATGCC GATACATTGA TGCTAAGCCA GTATTCGGAT CACTCTGTTG CCGCTGTCGG CGTAGCGAAT CAAATTATTG CTGTGATTAT TGTCATGTTT AATTTTATTG CCTTAGCCAC TGCCGTCTTA GTGGCGCAAT ATTTGGGGGC TGAAAGAAAG CAGCATGCAG TGGAAGTTTC GCTCATCTCT ATCGCTGTTA ACTTTTTGTT CGGCCTTGTA CTTAGCAGTG TGCTATTCTT TTTCGGAAAG CCAATTTTAT ATACGATGAA ACTATCGAAC CATTTGCTTA CAGAGGCGAA CGACTATTTA ATGATCGTCG GCGGATTTTT ATTTATTCAA GCGCTCATTA TGACCATTGG AGCTATATTA AAAAGCTATG GTTTTACCCG TGAAACGATG TACGTAACCA TCGGCATGAA CATACTGAAT GTGATTGGCA ACTACTTATT TATTTTTGGA CCGTTCGATT TTCCAGTATT AGGAGTAAAA GGGGTGGCAA TCTCGACAAC CGTCAGCCGT CTCATCGGAT TGATCGTTAT CTTTTCTTTA TTACTGAAAC GGACAAAAAT GCCATTTTCA TTATCCGTTC TTCGTTCTTT GCCATTTCAT CATATCCGGG ATCTATTGAA AATCGGAATT CCATCCGCTG GAGAACACTT GGCGTACAAT ACGGCGCAAA TGCTTATTAC GTATTTTATT ACTTGGCTTG GAGCAGAAGC GTTGACAACG AGAGTATATA CGCAAAATAT TATGATGTTT GTTTTTTTAT TTGGCATTGC GATAAGTCAA GGGACGCAAA TTCTTGTTGG CCATCTCGTC GGGGCCGGAC GCTATACAGA AGCATATACA CGTTGTTTAA AAAGTTTGCG CAGCGCCATC GTCATCTCGA TCACGATGGC ATCGATTAGT TTCATTTTCT CAAGACAGCT GCTTTCATTG TTTACAGATA ATGAACAAAT TATCGAAACA GGCCGATTGC TTCTCTTATT GACAATAGTA TTAGAGCCCG GACGTTCGTT TAATCTCGTC ATCATTAGTT CACTGCGGGC AGCTGGAGAT GTTAAATTTC CAGTATATAT GGGGATATTG TCCATGTGGG GCGTTAGTGT TGCCATTTCC TATTTTCTCG GTATTGAGGC TGGTTTAGGA CTGATTGGGG TATGGATTTC CTTTATTGCT GATGAATGGC TGCGTGGATT GCTGATGTTA TGGCGTTGGC GTTCGAAAGT GTGGATGAGA AAATCACTTA TACCAAGCAT AGAAACTGCA TAG
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Protein sequence | MNTDQKKLSL FALTWPIFIE TLLYMVMGNA DTLMLSQYSD HSVAAVGVAN QIIAVIIVMF NFIALATAVL VAQYLGAERK QHAVEVSLIS IAVNFLFGLV LSSVLFFFGK PILYTMKLSN HLLTEANDYL MIVGGFLFIQ ALIMTIGAIL KSYGFTRETM YVTIGMNILN VIGNYLFIFG PFDFPVLGVK GVAISTTVSR LIGLIVIFSL LLKRTKMPFS LSVLRSLPFH HIRDLLKIGI PSAGEHLAYN TAQMLITYFI TWLGAEALTT RVYTQNIMMF VFLFGIAISQ GTQILVGHLV GAGRYTEAYT RCLKSLRSAI VISITMASIS FIFSRQLLSL FTDNEQIIET GRLLLLLTIV LEPGRSFNLV IISSLRAAGD VKFPVYMGIL SMWGVSVAIS YFLGIEAGLG LIGVWISFIA DEWLRGLLML WRWRSKVWMR KSLIPSIETA
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