Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0402 |
Symbol | |
ID | 7978561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 460674 |
End bp | 461327 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644797388 |
Product | LmbE family protein |
Protein accession | YP_002948588 |
Protein GI | 239825964 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGAC ATATATTAGT CGTATTCCCC CATCCCGACG ATGAAGCGTT TGGAGTGTCT GGAACGTTAG CGCAGCACGC TGAAAATGGC ACACCGATTA CGTACGCCTG CTTAACCCTT GGAGAAATGG GAAGAAATAT GGGAGTGCCG CCATTTGCCA ACCGTGAAAC ACTTCCTCTC ATTCGCAAAA AAGAACTCGA AGAAGCATGT AAAACTATCG GCATCCATGA CTTGCGCTTA CTTGGATACC GCGATAAAAC GATAGAATTT GAGGATGAAG AATTGCTTGC CGATCGAATC GGAGAAATTG TCGCAGAAAC GAATCCATCG CTTGTCATTA CGTTTTACCC TGGTTATAGC GTCCATCCTG ATCATGACGC ATGCGGCGCC GCCGTTATTC GCGCTCTCAA GCGCCTTCCG AAAGACAAGC GCCCTGTCGT TCACTGCGTC GCGTTTTCCA AAAACTGTGA ACAAGATTTA GGAAAACCCG ATGTCATCCG CGACGTCAGC GCGGTTATCG ACAAAAAACT CGCCGCGATC CAAGCGCATC GCTCGCAAAC AGAAGGATTG ATGAAAGCGG CTGCCAAGCG GGGCGGCGAC GTGTTAGAAT GGCTGAAGAC CGAGCGGTTT TGGACGTATA AATGGGATGA TTGA
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Protein sequence | MERHILVVFP HPDDEAFGVS GTLAQHAENG TPITYACLTL GEMGRNMGVP PFANRETLPL IRKKELEEAC KTIGIHDLRL LGYRDKTIEF EDEELLADRI GEIVAETNPS LVITFYPGYS VHPDHDACGA AVIRALKRLP KDKRPVVHCV AFSKNCEQDL GKPDVIRDVS AVIDKKLAAI QAHRSQTEGL MKAAAKRGGD VLEWLKTERF WTYKWDD
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