Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0384 |
Symbol | |
ID | 7978544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 443004 |
End bp | 444158 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644797372 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_002948572 |
Protein GI | 239825948 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0854083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGCGT TAGTACTCGG ATGTGGATTG ATGGGAAAAG AAGCGGCGCG CGATTTAGTG CAAAGTGAAG AGGTTTCTTC CGTCACATTA GCGGATGTCG ATATCAAAAA GGCGGAGCGA GTTTGCCGGC AGTTATATTC TAGTAAAATC GAGGCGAAAC AAGTCGATGC ATCGAATGAA AGAAAGCTAG CGGCATTAAT GAGCGAACAT GATGTTGTCA TCAACGCGTT ATTTTATATT TTTAACGAAA TGGTGGCGAA AACAGCGATT CAAGTCGGTG CCCATTCTGT TGATTTAGGC GGGCATATCG GACATATTAC CGATCGCGTT TTACAATTGC ATGAGAAAGC AAAACAAGCT GGTGTGACGA TCATTCCTGA CTTAGGAGTG GCACCGGGAA TGATTAACAT TTTATCTGGC TACGGAGCTA GCAAACTAGA TGAATTGAAA TCCATTAAAC TATACGTCGG CGGGATTCCT GTGCGTCCAG AGCCCCCGTT GGAATACAAC CATGTCTTTT CACTGGAAGG ATTGTTGGAT CATTATACAG ACCCGTCTCT CATCATCCGG GATGGACGGA AGCAAGAAAT CCCATCTTTA TCAGAGATTG AAACCATCTA CTTTGATAGG TTCGGGCCGC TAGAAGCATT TCATACATCA GGAGGAACAT CCACGTTATC TTATTCCTAT CCGCAATTAG AATGTTTAGA ATATAAGACG ATCCGCTATC CAGGCCATGC GGAAAAATTT AAGCTGCTCG TCGATTTAAA TTTAACAAGA AATGACTACG AGGTGGAAGT GAAAGGGCAA AAAGTGAAGC CGCGAGACGT GCTTTTAGCA ACATTATCCC CGCTTTTAGA CTTAAAAGAT AAAGAGGATG TCGTCTTGTT AAGGGTGATT GTCGGAGGAA TAAAAAATAA TAAAGAAACG ATTTTTGAAT ATGAAACGGT CACATTTAAA GATCGAAAAA AGAATATTAC CGCAATGGCG CGGACAACAG CGAATACGAT TTCTGTCGTT GCACAAATGA TTGGAAACGG AATCATCGAA AAACGAGGTG TTTACCCGCC AGAACAAATC GTTCTGGGTG ACATCTACAT CAAGGAAATG GCAAAGCGCG GCGTTGTTAT CAAAGAGAAA CAATATGTAA AGTGA
|
Protein sequence | MRALVLGCGL MGKEAARDLV QSEEVSSVTL ADVDIKKAER VCRQLYSSKI EAKQVDASNE RKLAALMSEH DVVINALFYI FNEMVAKTAI QVGAHSVDLG GHIGHITDRV LQLHEKAKQA GVTIIPDLGV APGMINILSG YGASKLDELK SIKLYVGGIP VRPEPPLEYN HVFSLEGLLD HYTDPSLIIR DGRKQEIPSL SEIETIYFDR FGPLEAFHTS GGTSTLSYSY PQLECLEYKT IRYPGHAEKF KLLVDLNLTR NDYEVEVKGQ KVKPRDVLLA TLSPLLDLKD KEDVVLLRVI VGGIKNNKET IFEYETVTFK DRKKNITAMA RTTANTISVV AQMIGNGIIE KRGVYPPEQI VLGDIYIKEM AKRGVVIKEK QYVK
|
| |