Gene Vapar_6381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6381 
Symbol 
ID7975704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp1127681 
End bp1128250 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID644796948 
Producthypothetical protein 
Protein accessionYP_002948207 
Protein GI239821022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTCT TTCAAATGAC TTCTCCCGTC GCCGCGCGGC GCATGTTCCT CGGCCAGTCG 
GGGCTGGTGC TGTCCGGTGC CGCGGTCGCG CTGCTGGCCG GCCGCGATGC CCTGGCCGCC 
AAGACCGGCG GCGCCACCGG CAACGACGTG CAGATCCTCA ACACCGCGCT TGCCGCCGAA 
CTCGAGGCCA TTGCGGCCTA CCAGGCCGGA GCCGAGAGCA AGCTGCTCGA GAAGCCCGTG 
CTCGACCTGG CGCTGAGCTT CCAGGGCCAC CACAAGGAGC ATGCGGACCT GCTCGCCAAG 
ACGGTCGCCA AGCTCGGCGG CCATGCCGTG GCGGCCAAGG CCAGCTATGG CTTTCCGCTG 
GAGCAGCTGA AGTCGCAGGC CGACGTGCTG CGCTTTGCGG CCAAGCTGGA GCAGGGCGCC 
GTGAGCGCGT ACCTGGGTGC CGTGCCGCTG TTCGGCAATC GCGACCTGTC GAAGGCGGCT 
GCGAGCATCC TTGGCGACGA GGCGATGCAC TGGGCCGTGC TGCGGCAGGC ACTCGGCGAA 
ACGCCCGTGC CTTCGGCCTT CATGTCATGA
 
Protein sequence
MSFFQMTSPV AARRMFLGQS GLVLSGAAVA LLAGRDALAA KTGGATGNDV QILNTALAAE 
LEAIAAYQAG AESKLLEKPV LDLALSFQGH HKEHADLLAK TVAKLGGHAV AAKASYGFPL 
EQLKSQADVL RFAAKLEQGA VSAYLGAVPL FGNRDLSKAA ASILGDEAMH WAVLRQALGE 
TPVPSAFMS