| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6371 |
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| Symbol | |
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| ID | 7975693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1119067 |
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| End bp | 1119837 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796938 |
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| Product | ABC transporter related |
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| Protein accession | YP_002948197 |
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| Protein GI | 239821012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.57185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCG TTCCACACCC CGCAGGGGAT GACACCATGA TCCTGTTCTC CAACATCAAC
AAGTGGTATG GCGACTACCA GGCGCTCGCC GACGTCAACG CCGAGGTGAA GAAGGGCGAG
GTGGTGGTGG TCTGCGGGCC TTCGGGCTCG GGCAAGTCGA CGCTGATCCG CACCGTCAAC
CGCTTGGAGG AAGTGAAGTC GGGCCAGCTG CTGTTCGACG GCCACGACAT CCACGCGCCC
ATGAGCAGCG CGGCGCTCAA CAAGCTGCGC AGCCGCATCG GCTTCGTGTT CCAGAGCTTC
AACCTGTTTC CGCATCTCTC GGTGCTGGAG AACATCATGC TGTCGCCCAT GCGGGTGCTG
GGCGTGAAGC GGGCCGACGC GAAGGCGAGG GCGGCGCAGC TGCTCGAGCG CGTGGGCCTG
TCGAACAAGG CCGGCGCCTA CCCGGCGCAG CTGTCGGGCG GGCAGCAGCA GCGCGTGGCC
ATTGCGCGTG CGCTGGCCAT GGAGCCGCCT GCGATGCTGT TCGACGAGCC CACCAGCGCG
CTCGACCCCG AGATGGTGGG CGAAGTGCTG TCGGTGATGC GCGGCCTGGC CCACGACGGC
ATGACCATGA TGTGCGTCAC GCACGAGATG AACTTCGCCC GCGAGGTGGC CGACCGCGTC
TGGTTCATGG ACGCGGGCCG CATCCTCGAG AAGGCCGACC CCGAGGCCTT CTTCAAGAGC
CCGCAGCATC CGCGTGCGCA GCGCTTCTTG TCGGACCTGC GCGCGCACTG A
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| Protein sequence | MNPVPHPAGD DTMILFSNIN KWYGDYQALA DVNAEVKKGE VVVVCGPSGS GKSTLIRTVN
RLEEVKSGQL LFDGHDIHAP MSSAALNKLR SRIGFVFQSF NLFPHLSVLE NIMLSPMRVL
GVKRADAKAR AAQLLERVGL SNKAGAYPAQ LSGGQQQRVA IARALAMEPP AMLFDEPTSA
LDPEMVGEVL SVMRGLAHDG MTMMCVTHEM NFAREVADRV WFMDAGRILE KADPEAFFKS
PQHPRAQRFL SDLRAH
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