| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6347 |
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| Symbol | |
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| ID | 7975669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1083065 |
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| End bp | 1084099 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796915 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002948174 |
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| Protein GI | 239820989 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA ATGCAGCGTC GATCCAGCAG ATCAAGGCGA ACTTGCTGAC GCCCGCGGAA
AACTTCGAGC AATGGCGCGA CGGCCTTGCA AGTCTGTTCG AAACCGTTCG CCCTGACTCT
GAAAGAGAGG CGTTCCGCGC CGACCTCACC GCCTACAACC TGGGCAGTTT TCTGCTTGGC
CTTTCCTGCG CCTCGCCGCA GATGTTCCGT CGTGACCGGC AACTCGCCTC TGCCGTCGGG
GTCGACCATC TGTTGGTTCA ACTCTACGTG TCGGGTAAGT GCGAATTCGA AGCCGATGGC
CACGCAGGGC GCGGCAAGAC CGGCGACATC GTGTGTTTCG ACATGTCGCG GCAAATGAAC
TCCCGGACCT CTACGCTGGA AATGGTGAGC GTCGTCATTC CCAGGGAACT GCTGCGCCTT
GCCCCGCGCA CGCTGGACAC GCTGCACGGT GCCGTGCTCG ATGGGGAAAC CACGTTCGGC
ACGCTCCTGC GTGAACACCT GATGTCGATG GCACGGGTCG CCCCCCGGAT CAACGCCAGT
GAAAGCAAGC TCGCCGCCGA GGCGACCGCC ACGCTGATCT CGGCGAGCCT TTCGGGCTGC
GGTCCCGCGG GCAGCGATCT TGTTGGCGGC TCGCTGCAGG CGATCCAGAG CTATATCGAA
CGGAATCTGA ACAACCCGGC GCTGTCGCCT GAAATGCTGA TGCGCCATTT CGGACTGTCG
CGCTCAGCGC TGTATCGCAC CTTTGAGGCG CTGGGGGGTA TCGCCGAGTA CATTCGCGGC
CGTCGCCTCG ATCGCGCCTT CCTGCGCCTT ACCTCGGTGG GAACAGGCCG CGGGAGTGTC
TCGAAGCTCG CCTTCGCGTG CGGCTTCAGC AACGAAACTG CGTTCTCGCG GGCATTCCGC
CAACGCTTTG GCGTGCCTCC GCGCAACGCC CTCCTGGAAA CGGACCGGCG GACCTTGGTC
GGCACGCCCC TCGCCAGCCC ACAGGACAAT TGGCTGCAAG CCTGGCTCGA GGGCCTGACG
ATTTCAAGCA ATTGA
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| Protein sequence | MKNNAASIQQ IKANLLTPAE NFEQWRDGLA SLFETVRPDS EREAFRADLT AYNLGSFLLG
LSCASPQMFR RDRQLASAVG VDHLLVQLYV SGKCEFEADG HAGRGKTGDI VCFDMSRQMN
SRTSTLEMVS VVIPRELLRL APRTLDTLHG AVLDGETTFG TLLREHLMSM ARVAPRINAS
ESKLAAEATA TLISASLSGC GPAGSDLVGG SLQAIQSYIE RNLNNPALSP EMLMRHFGLS
RSALYRTFEA LGGIAEYIRG RRLDRAFLRL TSVGTGRGSV SKLAFACGFS NETAFSRAFR
QRFGVPPRNA LLETDRRTLV GTPLASPQDN WLQAWLEGLT ISSN
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