| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6345 |
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| Symbol | |
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| ID | 7975667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1079717 |
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| End bp | 1080709 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796913 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948172 |
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| Protein GI | 239820987 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCCG TCACCCGTCG CTCGTTCGTT TCCATGCTGG CGCTGGCCGG CACGCCGCTC
CTGTCCGTGC CGCTCGCGGC GCAGGCCCAA TCGCCCTGGC CCGTCCGGCC GGTCAAGCTC
GTGGTGCCGC AGGGCGCGGG TTCGGGATCG GACGTGATCG CGCGCCTGCT CAGCGACCGG
CTCGCCCAGC AGCTGGGCCA GGCGGTGGTG GTGGAGAACA ATCCGGCGGC CAACGGCCTC
GTGGCCCTGG GCGCCGTGGC CAAGGCGCCC GCCGACGGCT ACACGCTGGT GCTCGCGGGC
GTGTCGCAGA TCGCCTTCAA CCCGGCGCTG TACAAGAGCC TGCCCTACGA TCCGCTGAAG
GACTTCAGCT TTCTGGCGCC CGTGGCCGAT ACGCCCTTCG TGCTGGTGAC GAGCAACAAG
AGCGGCATCA AGACCTTCGC GCAGTTTCTC GAGCAGGCGA AGGCGAAGAA CGGCGAACTG
ACCTTCGGCA GCGCCGGCAT CGGCAACTCC ACCCACATCG CGATGGAACT GATCGCCGCG
ACCGCGGGCG TCAAGCTGAT GCACGTGCCC TACAAGGGCT CGGCCGCGGC GCTCACGGCC
GTGCTGGCGG GCGAGGTCGA CGCCATGGTG AGCGTCGTCG GCCCGGCGCT GCCGCAGGTG
CAGTCGGGCA AGGTGCAGGC GGTGGCGGTG CTCGGCGCCA GCCGCGTGCC GCAGTGGCCC
CAGGTGCCGA CGGTGAAGGA GGCGGGACTG AACGTGCCGC CGATGCCCGG CTGGTACGCG
ATTGCCGGCC CGGCGCGCCT GGATCCGAAG GTCGTTGCCA CCTTCAACGC CGCGCTGCAG
AAGGTGATGG CGGATCCGGC CGTCAAGGCC CGGCTGGCCG AACTCTCGCT GCCGGCCATG
AGCGGCGGCG AAGCGGATAT CCGCCGCCGC GCGATCGATG ACCAGGCTTT CTGGAGTGCC
TTCATCACCA GGAACAACAT CCGCGTGGAA TGA
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| Protein sequence | MPPVTRRSFV SMLALAGTPL LSVPLAAQAQ SPWPVRPVKL VVPQGAGSGS DVIARLLSDR
LAQQLGQAVV VENNPAANGL VALGAVAKAP ADGYTLVLAG VSQIAFNPAL YKSLPYDPLK
DFSFLAPVAD TPFVLVTSNK SGIKTFAQFL EQAKAKNGEL TFGSAGIGNS THIAMELIAA
TAGVKLMHVP YKGSAAALTA VLAGEVDAMV SVVGPALPQV QSGKVQAVAV LGASRVPQWP
QVPTVKEAGL NVPPMPGWYA IAGPARLDPK VVATFNAALQ KVMADPAVKA RLAELSLPAM
SGGEADIRRR AIDDQAFWSA FITRNNIRVE
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