| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6338 |
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| Symbol | |
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| ID | 7975660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1072903 |
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| End bp | 1073922 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796907 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002948166 |
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| Protein GI | 239820981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAACTT CAAGACACAG CACCCTGCGC GCCGGCCTTG CCGCGGTTGC GGCGCTCGCC
GTGCTGGCGG CTCTGGCCGG CATTGCCTAC GAGCAGATCG GTCGTTACCG CGCGGTACGA
GACTTCCCGG CGCCCGGGAA GATGGTCGAC GTCGGCGCCG GACGCCGCAT CCAGCTCGAC
TGCCGCGGCA CCGGCTCGCC CACCGTGGTG TTCGAAGCGG GCCTGAGCGT GGACGGATCG
CTGAGCTGGT CGGCCGTGCA GCCGAAGGTC GCGGCGCACA CGCGCGCATG CGCCTACAGC
CGCGCGGGGC TGATGTGGAG CGATCCTTCG AACACGCCGC CGGGCGCAGC GCAGGCGGTG
CACGACCTGC ACGCCGTGCT GGCCAAGTCG GGCGAACGCG GCCCCTTCGT GCTGGCCGGC
CAATCGCTGG GCGGACTCTA CGCCCTGGGC TTCACGCATC GCTTCGGCGC CGAGGTCGCG
GGGCTGGTGC TGGTCGATCC GTCGCATCCG GACCAGGTCG AGCGCGTGGC GCATTTCATG
ACCGAATCGC GCTCGATGCG CTCGCGCATC GGCATTGCGC TGGCACCGTT CGGCGTGCTG
CGCGCGGCCG CGCCGGTGCT GCTGCCGGAG AGCCCGCACC ACAGCGCACA GGACATGCAG
GCGGTCCGCG CCTTCGCGCC CAAGTCGCTG CGCACGCAGC TCGCCGAAAG CGATGCGGTC
GATGCCTCGC TGGCCGAAGC CATGGACTTC CAGCACCTGG GCGATCGTCC GCTGGTGGTG
CTGACCGCAA TGGCGCCATA CACCGCCGCG GAACTGCGCG GAATGAAGCT CACGCCCGAG
CAGGGCCGGC AGGTCCAGGC CATCTGGCAG CACATGCACG GGGAAATGGC GGCGTGGTCC
TCGCGCGGCA GGCAGCTGCT GGTGGCGGGC GCCGGGCACG ACATCCAGTT CGACGAGCCG
CAGGCGGTGG TGGACGCCGT GCTGTCGGTG GTCGACGCCG TGCGTGCGCA GCGCCGCTGA
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| Protein sequence | MKTSRHSTLR AGLAAVAALA VLAALAGIAY EQIGRYRAVR DFPAPGKMVD VGAGRRIQLD
CRGTGSPTVV FEAGLSVDGS LSWSAVQPKV AAHTRACAYS RAGLMWSDPS NTPPGAAQAV
HDLHAVLAKS GERGPFVLAG QSLGGLYALG FTHRFGAEVA GLVLVDPSHP DQVERVAHFM
TESRSMRSRI GIALAPFGVL RAAAPVLLPE SPHHSAQDMQ AVRAFAPKSL RTQLAESDAV
DASLAEAMDF QHLGDRPLVV LTAMAPYTAA ELRGMKLTPE QGRQVQAIWQ HMHGEMAAWS
SRGRQLLVAG AGHDIQFDEP QAVVDAVLSV VDAVRAQRR
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