| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6336 |
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| Symbol | |
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| ID | 7975658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1071466 |
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| End bp | 1072011 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796905 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_002948164 |
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| Protein GI | 239820979 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.565465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGATTC CACGCCAACA AGCCCCGGAC CTGAGTGTCG ACACCCTCGG CGCCGGCCGC
TTCCGGCTGA TCGACGAAAA GCCCGAGCGC ATGACGCTGG TGTGCTTCTA CCGTGGGCTG
CATTGCCCGA TCTGCGCCAG CTACCTGAAG GAACTCGAGC GGCTGACGCC GGCCTTCGCT
GAGCGCGGCG TCGCCACCAT CGCGATCAGT TCCGACGATG AGGCGCGTGC CCGCGCCATG
GCCGACAAGA TCGGCGCGGC CAAGCTGCGC ATCGGCCATG GCCTGTCGCT CGCGGACGCC
GGGAAGTGGG GCCTGTACAT CTCGGCGAGC CGGGGCAAGA CCTCCATCGG CATCGACGAG
CCGGCGCTGT TCTCCGAGCC GGGCCTGTTC CTCATCAGGC CCGACAACAC GGTCTATTAC
CTGTCCGTGC AATCGATGCC CTTCGTGCGG CCCAACTTCG CCGAGATGGT GCAGGCGCTG
GACTTCGTCA TCAAGAACGA CTACCCGGCG CGCGGCGAGC AGCTGCTGGA GCAGCCGGCG
GCCTGA
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| Protein sequence | MLIPRQQAPD LSVDTLGAGR FRLIDEKPER MTLVCFYRGL HCPICASYLK ELERLTPAFA
ERGVATIAIS SDDEARARAM ADKIGAAKLR IGHGLSLADA GKWGLYISAS RGKTSIGIDE
PALFSEPGLF LIRPDNTVYY LSVQSMPFVR PNFAEMVQAL DFVIKNDYPA RGEQLLEQPA
A
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