| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6327 |
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| Symbol | |
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| ID | 7975649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1063888 |
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| End bp | 1065129 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796896 |
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| Product | cardiolipin synthase 2 |
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| Protein accession | YP_002948155 |
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| Protein GI | 239820970 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACT CTCCCACCAG AGGCCTGGCC CGTGCCCGCT GGGTTCCGGG CAACCGGGTC
TCGCTGCTGG AGAACGGAGA GGAGTTCTTT CCGCGCGTGT TCGAGGCGGT GCGGCGCGCG
CAGCGCGAGG TGCTCATCGA GACCTTCATC CTGTATGAAG ACAAGGTCGG CACGCAACTG
CATGCCTGCC TGTGCGAGGC GGCCAGGCGC GGCGTCCGGG TCGACCTGCT GGTCGACGGC
TTCGGTTCAC CGGATCTCTC CGAGGCCTTC ATCCAAGAGA TGGCTGCGGC CGGCGTCCGG
CTCCGGGTGT TCGATCCGGG CCACAGCATC CTGGGGCAGC GGCTGAACCT GCTGCGCCGG
ATGCATCGCA AGATCGTGGT GGTCGACGAT GCCTGCGCCT TCGTGGGCGG CATCAACTTC
TCCGCCGATC AGCTGCTCGA CTTCGGCGCC ACGGCAAAGC AGGACTATGC GGTGGAACTG
AACGGACCGA TCGTGCAGCT GATCCATCGC TTCGCCGCGC GCGCGGTTGC CGCCGACAAG
AAGAAGGCGA AGCAAGGCGC GCGCAGCCAT CGGCCCGCGC CGCCGGAGCG CCAGCAGGAA
GGCAGCGGCC ACGCCACCGG CCATGCGCGC GCCGGCGAAG CCGAAGTGTG CCTGGTCACC
CGCGACAACT GGCGCCACAC GAACGACATC GAGCGCCACT ACCGTGTGGC CATCCGCAGC
GCACGGCAGC GCGTGGTCAT CGCCAACGCC TACTTCTTTC CCGGCTACCG CCTCATCCAG
GACATGCGCA ACGCGGCGCG GCGCGGCGTC GACGTGCGCC TCATCCTGCA GGGCGAGCCG
GACATCCCGA TCGTCAGGAT CGCGGCCCGC ATGCTGTACC ACCACCTGCT GATGGCCGGC
GTGAGCATCT TCGAATACTG CGAACGGCCG ATGCATGCCA AGGTGGCGCT CACCGACGAC
TGCTGGAGCA CCGTGGGCTC GAGCAACCTG GACCCGCTGA GCCTGGCGCT CAATCTCGAG
GCCAACGTGG TCGTGCACGA CCCGGCGTTC AATCGCGCAC TGTCCGAGCG GCTCGAGCAC
ATGAACCGCA ACTGCAAGCG GATCGGGGCC GCGGACCTGG ACAAGTGGAG CAGCTGGCGG
CTGGTGCGCA GCTTCGTCGT CTTTCACCTG CTGAGGTGGT ATCCCTCATG GATCGCATGG
CTGCCGCGCC ATGCGCCGCG CGTGACTGCG CTGGGCCGCT GA
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| Protein sequence | MKNSPTRGLA RARWVPGNRV SLLENGEEFF PRVFEAVRRA QREVLIETFI LYEDKVGTQL
HACLCEAARR GVRVDLLVDG FGSPDLSEAF IQEMAAAGVR LRVFDPGHSI LGQRLNLLRR
MHRKIVVVDD ACAFVGGINF SADQLLDFGA TAKQDYAVEL NGPIVQLIHR FAARAVAADK
KKAKQGARSH RPAPPERQQE GSGHATGHAR AGEAEVCLVT RDNWRHTNDI ERHYRVAIRS
ARQRVVIANA YFFPGYRLIQ DMRNAARRGV DVRLILQGEP DIPIVRIAAR MLYHHLLMAG
VSIFEYCERP MHAKVALTDD CWSTVGSSNL DPLSLALNLE ANVVVHDPAF NRALSERLEH
MNRNCKRIGA ADLDKWSSWR LVRSFVVFHL LRWYPSWIAW LPRHAPRVTA LGR
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