| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6310 |
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| Symbol | |
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| ID | 7975632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1048010 |
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| End bp | 1048987 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796880 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948139 |
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| Protein GI | 239820954 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.238348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCC ACTTTCTCAC CCTTGGCCTC ACCCTGCTCG CCGCACTGCC GCTCGCGGGG
CTCGCCCAAG GGAGCTTCCC GGGCAAGCCG ATCCGCATCG TCGTCACGGC CCAGGCCGGC
GGCGCCAACG ACTTCGTCGC GCGCCTGATC GGCGAGCATG CCGCGAAGGC GCTGGGCCAG
CCCTTCGTGG TCGACAACCG TGCCGGCGTC AACGGCGCGG TGGGCCTGGG CGAAGTGGCG
CGGGCCGCGC CCGACGGCTA CACGATCGCG GTCACGCTCG GCGATTCGCT CATCAACAAC
GTCGCGCTCT ACAAGACGCT GCCCTACGAC CCGCAGCGCG ACTTCGTCTT CCTGACGCAG
GTCGTGCGCA GCCCGGCCAT CCTGTCGGCC AACCTCGAGC TCGGCGTGAA GGACATGGAA
GGCTTCCGCA AGCTCGCGGC GCGGCCGGGC CAGCAACTCA GCTATGGCAC CTGGGGACCG
GGCGGGCTTG GCCACCTGGC GGGCGAGGCG CTCAACCGCA AGCTCGATGC GCACATGGTG
CACGTGCCGC AGCGCGGCGA GGCGCCCGTC ATGGCCGACC TGCTGAGCAA CACCGTGAGC
GTCGGCCTCA CGTCGGCGGG CCTGGCGCGC CAGCATGTGC AGGCGGGCAA GGTCGTTCCG
CTCGCGATCA TGGGGCGCGA GCGCTCGGCC GTGCTGCCGC AGGTGCCCAC GATGCGCGAA
CTGGGCTTCG ACGATCCGCT GTTCGAGGCG GCGGTATGGA TCGCGTTCGT CGCGCCCGCC
AGGACGCCGC CCGCGGTGGT CAAGCGGCTG ACGGTGGCGC TACGCAACGC CGCCGCCATG
CCCGAGGTCC AGGCGCGGAT GGCGGAGCGC GGGCTGGAGA TGCTCAACAC CACGCCCGAG
CAGTTCACCG CGAACTACCG GCGCGACTTC GACGTGATCA CCCGGCGCAT GCGGGAGTTC
GGCATCGAGG CGCAGTAG
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| Protein sequence | MRRHFLTLGL TLLAALPLAG LAQGSFPGKP IRIVVTAQAG GANDFVARLI GEHAAKALGQ
PFVVDNRAGV NGAVGLGEVA RAAPDGYTIA VTLGDSLINN VALYKTLPYD PQRDFVFLTQ
VVRSPAILSA NLELGVKDME GFRKLAARPG QQLSYGTWGP GGLGHLAGEA LNRKLDAHMV
HVPQRGEAPV MADLLSNTVS VGLTSAGLAR QHVQAGKVVP LAIMGRERSA VLPQVPTMRE
LGFDDPLFEA AVWIAFVAPA RTPPAVVKRL TVALRNAAAM PEVQARMAER GLEMLNTTPE
QFTANYRRDF DVITRRMREF GIEAQ
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