Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6309 |
Symbol | |
ID | 7975631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 1046945 |
End bp | 1047970 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796879 |
Product | Rieske (2Fe-2S) domain protein |
Protein accession | YP_002948138 |
Protein GI | 239820953 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.241664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGTTC GAAACTGCTG GTACGTCATT GCGTGGGATC ACGAAATTTC CGACGACGCG CTGTTCACGC GCACGGTGCT CGACGAGCCG ATCCTGGTCT ATAGAACCGA GGGCGGCGAG CTCGTGGCGA TGCAGGACCG CTGCTGCCAC CGGCATGCGC CGCTGTCGCG CGGACGCAGG GAAGGCGACT GCGTGCGCTG CGGCTACCAC GGCCTCAAGT TCGCCGCCGA CGGCGTTTGC GTGGAGGCAC CGGGGCTGGC CAGCATTCCC GTGAAGGCGC GCGTGCGGAC CTACCCGGTG GTCTCGCACA ACAAGTGGAT CTTCGTGTGG ATGGGTGATC CGTCGCTCGC GGATCGCGCG CTGCTGCCGG ACAACTTCTC GTGCGACCAC CCCGACTGGC GCTACAGGCC CGGCTATGTC CACTACGACA CGCCCTACCT GCTGGTCTGC GACAACCTGC TGGACTTCTC GCACCTGAGC TATGTGCATG AAGGCACGCT GGGCGGATCG ACGGCCATCG CCCAGGCCGT GCCCAGGATC GAGAAGGTGC CGCGCGGCAT CCGCGTGACG CGGCACGTGC CCGACGTGCC CCCGTCTCCC TTCTGGAAGT CGTTCCAGAG TTTCGAGAGC AACGTCGACC GCTACTTCAT CTACGACTTC CTCCTGCCCG GCACCTTGCT GATGAAGTCG GGCGGCGCGC CGGTGGGGCA GGCCGAAGAC GAGCAGCGCG GCGGCGTGCA GCTGCACAGT TGCCAGGCGC TCACGCCCGA GACCGCAACG ACCACGCACT ACTTCTTCCA GCAGTCGCAC CGAAGCAGCA TCGCGGACCC CGCGGTCACC GAGACCATCT ACCGCGGCCT GGTCACCGCG TTCGAGGAAG ACCGCGAAAT GATCACCGCG CAGTACCTGA ACATCGATCC CGAAGCGCGC ATGCTGCCGC TCGCGATGGA CGCCGCGCTG GTGCAGTACC GGCGGCTGCT GCAGGAAGAG GTCGAGCGCG AGCAGCGCGC CTCGCAGGCC GGCTGA
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Protein sequence | MWVRNCWYVI AWDHEISDDA LFTRTVLDEP ILVYRTEGGE LVAMQDRCCH RHAPLSRGRR EGDCVRCGYH GLKFAADGVC VEAPGLASIP VKARVRTYPV VSHNKWIFVW MGDPSLADRA LLPDNFSCDH PDWRYRPGYV HYDTPYLLVC DNLLDFSHLS YVHEGTLGGS TAIAQAVPRI EKVPRGIRVT RHVPDVPPSP FWKSFQSFES NVDRYFIYDF LLPGTLLMKS GGAPVGQAED EQRGGVQLHS CQALTPETAT TTHYFFQQSH RSSIADPAVT ETIYRGLVTA FEEDREMITA QYLNIDPEAR MLPLAMDAAL VQYRRLLQEE VEREQRASQA G
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