| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6280 |
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| Symbol | |
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| ID | 7975496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1017281 |
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| End bp | 1017982 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796850 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002948109 |
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| Protein GI | 239820924 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000068764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC CGCGCACCAC GACCCCACCC CCGGCTGCCT CGCCTGCGCT CTCGCGCACG
GACGCGGCCT ATGAAAGCCT GCGCCGGCGC ATCCTCGACA ACATATGGCC GCCCGGCCAT
CAGGCGCTGG AGCAGGAGAT CGCGCTGGAA CTTGGCCTGA GCCGCACACC AGTGCGCGAA
GCGCTGATCC GGCTCGAGCG CGAAGGCCTG GTGCAGGTGA TCCCGCGCCA CGGTATGCGC
GTGCTGCCGA TGTCGGCCAC TGACATGCGC GAGATCTACG AGATCCTCAC CGCGCTCGAA
AGCCTGGCCG TCGAGATCGT GGCAACACGC CGCCCGTCGG ACTCCGAGCT GGCGCCGCTG
GTGCGCGCGA CGCAGGCGAT GGAACACGCA TTGGCCAAGG ACGATCTCGA CGCCTGGGCA
CGCGCCGACG AGAGCTTCCA TGCGCAGCTG GTCACCATGG CCGGCAACCG CCTGCTGACC
GAGGCCGTCT TCAGTCATTG GGACCGCGCG CACCGCGCCC GCATGTTCAC GCTGCGGCTG
CGGCCCAAGC CGGTGAATTC AACGCAGGAA CACACAGCGC TGGTGGAGTG CCTGCGCGCC
GGCGATTCGG CCGGCGCATC GGCAGTGAAC CGTGCCCACC GCCAGCGCGC GAGCCGCGAG
CTGCTGGCGC TGTTCGAGCG CTACCGCCTG CAGCAGATGT AG
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| Protein sequence | MPTPRTTTPP PAASPALSRT DAAYESLRRR ILDNIWPPGH QALEQEIALE LGLSRTPVRE
ALIRLEREGL VQVIPRHGMR VLPMSATDMR EIYEILTALE SLAVEIVATR RPSDSELAPL
VRATQAMEHA LAKDDLDAWA RADESFHAQL VTMAGNRLLT EAVFSHWDRA HRARMFTLRL
RPKPVNSTQE HTALVECLRA GDSAGASAVN RAHRQRASRE LLALFERYRL QQM
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