| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6195 |
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| Symbol | |
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| ID | 7975085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 928401 |
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| End bp | 928817 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796765 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_002948024 |
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| Protein GI | 239820839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.393332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGGTG AGAACGTTGC CGAGTCCAAC GACATGTCGG GCCCGGTCCA TGTCGCAGTG
CCCGCGCTGG CCAGGCCGGG CGGTCACTAC AGCCATGCCG CCGTTGGCGG CGGCCTGGTC
TTCATCGCCG GGCAATTGCC GATCACGCCG GCCGGCGAGC GCCTGGCCGA TGCGGCTTTC
GAGGTGCAGG CGGCGCAGAC GCTGGCGAAC GTGGAGGCGG CCTTGCTCGC CGCGGGTTCG
GGCATCGGCA AGCTGCTGCA GGTAAGGGTC TACCTCGACG ACATCGCCAA CTGGCCGGCC
TTCGACAGGA TCTATGCGCA GTGGGCCGGA CCCTCGCGCC CGGCCCGGGC CGTCGTGCCG
ACTGGGCCGC TGCATTTCGG GTTCAAGGTC GAGGTGGAGG CGATGGCGCT TGGGTGA
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| Protein sequence | MAGENVAESN DMSGPVHVAV PALARPGGHY SHAAVGGGLV FIAGQLPITP AGERLADAAF
EVQAAQTLAN VEAALLAAGS GIGKLLQVRV YLDDIANWPA FDRIYAQWAG PSRPARAVVP
TGPLHFGFKV EVEAMALG
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