| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6194 |
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| Symbol | |
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| ID | 7975084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 927257 |
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| End bp | 928411 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796764 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002948023 |
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| Protein GI | 239820838 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.647866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACA TGCAGAACTC CCCTCCAAAC CTCGCCGACA TCGACACCCC CGCCGCCATC
GTGTCGCTTC CGCGCATGCA GCGGAACATC GCGCGCATGC AGCAGCAGGC CGATGCGCTG
GGCGTGCGCT TTCGCCCGCA CGTGAAGACC AGCAAATGCG CCGATGTGGT CGCGGCCCAG
CTTGCCGCTG GCGCGGCGGG CATCACGGTG TCGACGCTGA AGGAGGCCGA CCAGTTCTTC
GCCCGCGGCG TGACCGACAT CCTCTATGCC GTCGGCATGG CGCCGCACCG GCTCGCGCAT
GCGCTGGACC TGCGCCAGCG CGGCTGCGCA CTGCAGATAC TGACCGACAG CGTCGAAGGC
GCGCGGGCCA TCGCCGACTA CGGCCGTGCG CACGGCCACG CCTTCGAGGT GCTCATCGAG
ATCGACACCG ATGGCCACCG CTCCGGCATC AAGCCGGGCG AGGACCTGCT GCTCGAGGTC
GGCCGCATGC TGCACGAGGG CGGCATGCGC CTGGCCGGCG TGCTGACGCA TGCGGGCTCC
AGCTACGAAC TGCACACGCC CCAGGCCCTG GCCGCGCTGG CCGAGCAGGA ACGCGCCGGC
TGCGTGCAGG CCGCGCAGCG CCTGCGCGCC GCGGGCCTGC CGTGCCCCAT CGTGTCGGTG
GGCTCCACCC CCACGGCGCT GGAAGCCGCG TCGCTGGATG GCGTCACCGA ACTGCGCGCC
GGGGTCTATG TCTTCTTCGA CCTGGTGATG CGCAACGTGG GCGTCTGCCG CACCGAAGAC
ATTGCGCTGA GCGTGCTCAC CACCGTGATC GGGCACCAGG CCGACAAGGG CTGGGCCATC
GTCGATGCCG GCTGGATGGC CATGAGCCGC GACCGGGGCA CGGGCAAGCA GCAGCGCGAC
TACGGCTATG GCCAGGTGTG CACCGTGGAC GGAGTGCCGA TCGAGGGCTA CCTGCTGTCG
GCCGCCAACC AGGAGCACGG CATCCTCTCG CGCGAGGGCG CTGCGGACCC GGACATCGTG
GCGCGCTTTC CGGCCGGAAC CCGGCTGCGC ATATTGCCCA ACCATGCCTG CGCCACCGGC
GCGCAGTTTC CCGCCTACCA GGCGCTGGCC GAGGACGGCA CGGTGCAAAC CTGGGAGCGC
TTCCATGGCT GGTGA
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| Protein sequence | MDNMQNSPPN LADIDTPAAI VSLPRMQRNI ARMQQQADAL GVRFRPHVKT SKCADVVAAQ
LAAGAAGITV STLKEADQFF ARGVTDILYA VGMAPHRLAH ALDLRQRGCA LQILTDSVEG
ARAIADYGRA HGHAFEVLIE IDTDGHRSGI KPGEDLLLEV GRMLHEGGMR LAGVLTHAGS
SYELHTPQAL AALAEQERAG CVQAAQRLRA AGLPCPIVSV GSTPTALEAA SLDGVTELRA
GVYVFFDLVM RNVGVCRTED IALSVLTTVI GHQADKGWAI VDAGWMAMSR DRGTGKQQRD
YGYGQVCTVD GVPIEGYLLS AANQEHGILS REGAADPDIV ARFPAGTRLR ILPNHACATG
AQFPAYQALA EDGTVQTWER FHGW
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