| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6193 |
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| Symbol | |
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| ID | 7975083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 926264 |
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| End bp | 927250 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796763 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948022 |
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| Protein GI | 239820837 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.943735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCT CCCTTCGCCT GGCCGGCAGC CTTGCCGCCT TCTGCGCCGG CTTGCTGGCC
GCACCTGGTG CTGCCGCCCA GCCGTTTCCG AGCCGCCCGG TCACGCTGAT CGTTCCTTTC
CCCGCCGGCG GTCCCAGCGA TGCACTGGCC CGCGCCGTCG CGCAGAAGAT GGCAGCGCCG
CTGGGCCAGC CCATCGTCAT CGAGAACCTC GGCGGCGCTA ACGGCGTCAT CGGCCTGGCG
AAGGCGACCA AGGCCGCCGC CGACGGCTAC ACCATCTCGT TCGGAGGCAT CGGCACGCAC
GTGGCCAACC TCGCGCTGTA CAAGAAGCTG GCCTACGACC CCGTCGCCGA TTTCGCGCCC
ATCGGCCCCG CGGGCGCGGC ACCGATGCTG CTGCTGGCCC GCGCCGACCT GCCGGCCAAC
GATCTGCGCG AGTTCAGCGC CTGGCTGGCG AAGCACAAGG ACAAGGCCTC CTACGGCAGC
GCGGGCGTGG GGTCGATCTC GCACTACGGC TGCGTGCTGT TGCTGTCTTC CCTCGGCCAG
AACGCCACGC ATGTGCCCTA CAAGGGCGTT GCGCCGGCGG TCAACGACCT GATGGGCGGG
CAGACCGATT TCATGTGCGA CCAGACCACC ACCGCATTGC CGCAGATCGC CGGCGGGCGC
ATCAAGGCCA TCGCCGTGCT GTCGGGCACG CGCCTCGTGC AGTTGCCGCG TGCAGCCACC
GCGGCGGAAG GCGGCCATGC GCTGGACGTG CGTTCCTGGA ATGCCTTCTT CGCCCCGCGC
GGCACGCCGC CGCCCGTGCT TGCCAGGCTG ACCGGCGCAC TGCAGCAGGC GGTGGCCGAT
CCGGCGCTGC GCAAGCAGAT GGAAGGGCTG GGCGTCGACC TGCCCGCACC TGCCGATGCA
ACGCCCGCGA CCGTCGCCGC GCTCATTGCG CGCGGCATCC GCGACGACGT GCCGGCCCTC
AAGGCCAAGG GCCAATACCT GGACTGA
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| Protein sequence | MIRSLRLAGS LAAFCAGLLA APGAAAQPFP SRPVTLIVPF PAGGPSDALA RAVAQKMAAP
LGQPIVIENL GGANGVIGLA KATKAAADGY TISFGGIGTH VANLALYKKL AYDPVADFAP
IGPAGAAPML LLARADLPAN DLREFSAWLA KHKDKASYGS AGVGSISHYG CVLLLSSLGQ
NATHVPYKGV APAVNDLMGG QTDFMCDQTT TALPQIAGGR IKAIAVLSGT RLVQLPRAAT
AAEGGHALDV RSWNAFFAPR GTPPPVLARL TGALQQAVAD PALRKQMEGL GVDLPAPADA
TPATVAALIA RGIRDDVPAL KAKGQYLD
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